RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PRAMEF7Q5VXH5 474 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 H3F3CQ6NXT2 135 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM71Q6P5X7 295 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 LCTLQ6UWM7 567 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 GDPD4Q6W3E5 623 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 Q6ZVU0 165 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 PGAP1Q75T13 922 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 RAB40AQ8WXH6 277 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 VRK1Q99986 396 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF471Q9BX82 626 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 C14orf105Q9NVL8 296 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF223Q9UK11 482 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 V9GY05 133 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 BRCA2P51587 3418 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 TRBV23-1A0A0A0MS06 115 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 SCAMP1O15126 338 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 TO15178 435 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 SMIM6P0DI80 62 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ITPKBP27987 946 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 AGTR1P30556 359 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 PRKAR1BP31321 381 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 PDX1P52945 283 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ACTC1P68032 377 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ACTA1P68133 377 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 PLA2G7Q13093 441 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 TEAD2Q15562 447 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 FAM109BQ6ICB4 259 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 RPL22L1Q6P5R6 122 aaKnown RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 C5orf46Q6UWT4 87 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 DNM1P46Q6ZS02 220 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM150AQ86TG1 271 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 OR51S1Q8NGJ8 323 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 OR13C2Q8NGS9 318 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 OR6N1Q8NGY5 312 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 FIBINQ8TAL6 211 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 TCEAL3Q969E4 200 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ZMYND19Q96E35 227 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF764Q96H86 408 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 MNTQ99583 582 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 KRCC1Q9NPI7 259 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 CLDND1Q9NY35 253 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 HAO2Q9NYQ3 351 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 WSB2Q9NYS7 404 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 DHCR7Q9UBM7 475 aaKnown RBP9.79□□□□□ -0.84
CCDC171-208ENST00000486641 TAC3Q9UHF0 121 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 GNG8Q9UK08 70 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF337Q9Y3M9 751 aa9.79□□□□□ -0.84
CCDC171-208ENST00000486641 A0A1B0GTQ1 180 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 OR5H14A6NHG9 310 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 H7BY64 318 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 NDUFS4O43181 175 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 BCL2L11O43521 198 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 CTNSO60931 367 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 DUSP11O75319 330 aaKnown RBP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 GLSO94925 669 aaPredicted RBP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 ACTL6AO96019 429 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 S100A9P06702 114 aaKnown RBP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 AKR1A1P14550 325 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 NTSP30990 170 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 FAUP35544 74 aaKnown RBP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 GPR143P51810 404 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 C9orf64Q5T6V5 341 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 TXNDC8Q6A555 127 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 OR4C11Q6IEV9 310 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM64Q6YI46 380 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 BEST3Q8N1M1 668 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 MIB2Q96AX9 1013 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 PRAP1Q96NZ9 151 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 PTPN18Q99952 460 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 SYNPO2LQ9H987 977 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 APMAPQ9HDC9 416 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 TNFSF18Q9UNG2 199 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 SLC35A3Q9Y2D2 325 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 DTX4Q9Y2E6 619 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 CARHSP1Q9Y2V2 147 aaKnown RBP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 TRAV27A0A087WT01 109 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 OR14I1A6ND48 311 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 SYNDIG1LA6NDD5 238 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 RIIAD1A6NNX1 92 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 H7C417 338 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 MPIP34949 423 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 PNLIPRP2P54317 469 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 ILF3Q12906 894 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 ECH1Q13011 328 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 HABP2Q14520 560 aaPredicted RBP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 GLT8D1Q68CQ7 371 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 MRM1Q6IN84 353 aaKnown RBP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 RAB12Q6IQ22 244 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 KRT77Q7Z794 578 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 C17orf64Q86WR6 236 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM151BQ8IW70 566 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 OR51L1Q8NGJ5 315 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 OR51A7Q8NH64 312 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 OR4C6Q8NH72 309 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 SFXN5Q8TD22 340 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 ELP5Q8TE02 316 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 SNX33Q8WV41 574 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 EDARADDQ8WWZ3 215 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 MYLIPQ8WY64 445 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 CNRIP1Q96F85 164 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms