RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NPY2RP49146 381 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 CCNG1P51959 295 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 HNRNPFP52597 415 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 BTG2P78543 158 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 GALK2Q01415 458 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 RGS1Q08116 209 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 KCNJ11Q14654 390 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 PHKG1Q16816 387 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 PPP1R3AQ16821 1122 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 FBXL19-AS1Q494R0 122 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 DEFB134Q4QY38 66 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 TMEM41BQ5BJD5 291 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 CATSPEREQ5SY80 951 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 HES5Q5TA89 166 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 HECTD2Q5U5R9 776 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 FAM91A1Q658Y4 838 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 AADACL2Q6P093 401 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 PLEKHG7Q6ZR37 379 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 ABHD13Q7L211 337 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 EIF3MQ7L2H7 374 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 ADAMTSL2Q86TH1 951 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 NATD1Q8N6N6 113 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 PRELID2Q8N945 189 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 L3MBTL4Q8NA19 623 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 MFSD9Q8NBP5 474 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 APCDD1LQ8NCL9 501 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 C19orf18Q8NEA5 215 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 MZB1Q8WU39 189 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 ASB15Q8WXK1 588 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 LPGAT1Q92604 370 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 MRGPRFQ96AM1 343 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 FAM136AQ96C01 138 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 DAZAP1Q96EP5 407 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 DUS3LQ96G46 650 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 KRT12Q99456 494 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 ALKBH7Q9BT30 221 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 IL22Q9GZX6 179 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 RIMS4Q9H426 269 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 SP140LQ9H930 580 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 RNPEPL1Q9HAU8 725 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 IL1RL2Q9HB29 575 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 HEYLQ9NQ87 328 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 DIABLOQ9NR28 239 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 TUBG2Q9NRH3 451 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 TREX1Q9NSU2 369 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 DEPPQ9NTK1 212 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 ZCCHC3Q9NUD5 404 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 BFARQ9NZS9 450 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 CLEC2DQ9UHP7 191 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 DRG1Q9Y295 367 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 MMACHCQ9Y4U1 282 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 IGKV3D-11A0A0A0MRZ8 115 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TRGV5A0A0B4J1U4 118 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ATP6AP2A0A1C7CYW4 349 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 PINLYPA6NC86 204 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 SDR42E2A6NKP2 422 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 BET1O15155 118 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 SLC16A5O15375 505 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 NDUFS4O43181 175 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF208O43345 1280 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 OR1F1O43749 312 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 UGDHO60701 494 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 SUPT3HO75486 399 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ATP6AP2O75787 350 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 GLSO94925 669 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 VAPBO95292 243 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 RLN1P04808 185 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 SERPIND1P05546 499 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 GNAO1P09471 354 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 CD3GP09693 182 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 PEPDP12955 493 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 NQO2P16083 231 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 OGNP20774 298 aaKnown RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 MAOAP21397 527 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 BMP5P22003 454 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TACR1P25103 407 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 NMBRP28336 390 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TACR3P29371 465 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 CD79BP40259 229 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 MAGEA5P43359 124 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 CCR8P51685 355 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 NR0B1P51843 470 aaKnown RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TBPL1P62380 186 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 PDCD4Q53EL6 469 aaKnown RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 PDLIM3Q53GG5 364 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TEX30Q5JUR7 227 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 DUPD1Q68J44 220 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 LCTLQ6UWM7 567 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ESPNLQ6ZVH7 1005 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ENTHD1Q8IYW4 607 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 SELENOHQ8IZQ5 122 aaKnown RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 LRRC75A-AS1Q8N1F1 130 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF786Q8N393 782 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TMEM251Q8N6I4 163 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TMEM116Q8NCL8 245 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF740Q8NDX6 193 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 OR4K14Q8NGD5 310 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 OR13F1Q8NGS4 319 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 DTD1Q8TEA8 209 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms