RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 DLEU7Q6UYE1 221 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 ATG4DQ86TL0 474 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-208ENST00000486404 RETREG3Q86VR2 466 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 TGIF2LYQ8IUE0 185 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 P3H2Q8IVL5 708 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 SLC30A8Q8IWU4 369 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 OR9K2Q8NGE7 335 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 STK35Q8TDR2 534 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 TRIM2Q9C040 744 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 TAS2R16Q9NYV7 291 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 MALT1Q9UDY8 824 aa11.39□□□□□ -0.59
CHMP3-208ENST00000486404 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
CHMP3-208ENST00000486404 A0A1B0GWA3 101 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 BBIP1A8MTZ0 92 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 ARHGEF9O43307 516 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 KRT33AO76009 404 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 PNMTP11086 282 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 CD99P14209 185 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 LOXP28300 417 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-208ENST00000486404 PCGF2P35227 344 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 RPS5P46782 204 aaKnown RBP11.38□□□□□ -0.59
CHMP3-208ENST00000486404 IL1RL1Q01638 556 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 FAPQ12884 760 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 CYLC2Q14093 348 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-208ENST00000486404 SELPLGQ14242 412 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 SLC17A1Q14916 467 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 Q5PR19 223 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 TIMM23BQ5SRD1 257 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 INTS11Q5TA45 600 aaKnown RBP11.38□□□□□ -0.59
CHMP3-208ENST00000486404 TMEM225Q6GV28 225 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 C5orf46Q6UWT4 87 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 P2RY8Q86VZ1 359 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 TMEM99Q8N816 258 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 SLC26A7Q8TE54 656 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 TMEM171Q8WVE6 324 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 DNAJA4Q8WW22 397 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-208ENST00000486404 AKAP1Q92667 903 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHMP3-208ENST00000486404 SLC38A4Q969I6 547 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 TMEM45BQ96B21 275 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 SLC25A36Q96CQ1 311 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 PIP5K1AQ99755 562 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 SF3B5Q9BWJ5 86 aaKnown RBP11.38□□□□□ -0.59
CHMP3-208ENST00000486404 EVA1AQ9H8M9 152 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 C12orf10Q9HB07 376 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 TMEM27Q9HBJ8 222 aa11.38□□□□□ -0.59
CHMP3-208ENST00000486404 ROS1P08922 2347 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 ARID1AO14497 2285 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 OR5H1A6NKK0 313 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 HS3ST1O14792 307 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 MRASO14807 208 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 VAMP5O95183 116 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 OPN1SWP03999 348 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 HTR2AP28223 471 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 NKX6-1P78426 367 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-208ENST00000486404 BSPH1Q075Z2 132 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 ADRM1Q16186 407 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 GLIPR1L2Q4G1C9 344 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 C9orf135Q5VTT2 229 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 FAM91A1Q658Y4 838 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 REP15Q6BDI9 236 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 OR7E24Q6IFN5 339 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 ADAM5Q6NVV9 412 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 ULK3Q6PHR2 472 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 KLHL17Q6TDP4 642 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 KLHL24Q6TFL4 600 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 C6orf89Q6UWU4 347 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 AAED1Q7RTV5 226 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 ABHD12BQ7Z5M8 362 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-208ENST00000486404 PATL1Q86TB9 770 aaKnown RBP11.37□□□□□ -0.59
CHMP3-208ENST00000486404 COMTD1Q86VU5 262 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 PTOV1Q86YD1 416 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 ZNF433Q8N7K0 673 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-208ENST00000486404 SMYD1Q8NB12 490 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 OR52N5Q8NH56 324 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 FBXW5Q969U6 566 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 SLC47A1Q96FL8 570 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 PERPQ96FX8 193 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 EPYCQ99645 322 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 SH3GL1Q99961 368 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 SLCO5A1Q9H2Y9 848 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 CXorf56Q9H5V9 222 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 RASD1Q9Y272 281 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 CAPN7Q9Y6W3 813 aa11.37□□□□□ -0.59
CHMP3-208ENST00000486404 MAP1AP78559 2803 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-208ENST00000486404 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 M0R3H8 397 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 AIM2O14862 343 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 OR2T1O43869 369 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 TPST1O60507 370 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 PLAUP00749 431 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 TGFBR3Q03167 851 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 DMTNQ08495 405 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 FOXD4Q12950 439 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-208ENST00000486404 COQ5Q5HYK3 327 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 NCMAPQ5T1S8 102 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 FAM69AQ5T7M9 428 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 NET1Q7Z628 596 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-208ENST00000486404 SNX32Q86XE0 403 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 LSMEM1Q8N8F7 131 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 POMGNT2Q8NAT1 580 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms