RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 TMEM229AB2RXF0 380 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 PDLIM1O00151 329 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 VAMP5O95183 116 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 SLC6A2P23975 617 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 PTH2RP49190 550 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 P2RY4P51582 365 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 FOXG1P55316 489 aaPredicted RBP16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 SCARB2Q14108 478 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 ADRM1Q16186 407 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 GABRA6Q16445 453 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 ZNF672Q499Z4 452 aaPredicted RBP16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 METTL21CQ5VZV1 264 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 YTHDF3Q7Z739 585 aaKnown RBP16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 DPP10Q8N608 796 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 LSMEM1Q8N8F7 131 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 OR9K2Q8NGE7 335 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 TSPEARQ8WU66 669 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 FBXW5Q969U6 566 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 ZNF607Q96SK3 696 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 C12orf10Q9HB07 376 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 NPHS2Q9NP85 383 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 SLC7A10Q9NS82 523 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 ADPRHL2Q9NX46 363 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 RPS6KB2Q9UBS0 482 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 LAMP3Q9UQV4 416 aa16.21■□□□□ 0.19
PRPF40A-209ENST00000486100 PRORSD1PA6NEY8 169 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 TPST1O60507 370 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 ITGA5P08648 1049 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 TSPO2Q5TGU0 170 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 AAED1Q7RTV5 226 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 BIVMQ86UB2 503 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 GPAT4Q86UL3 456 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 OR52N5Q8NH56 324 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 MFSD8Q8NHS3 518 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 NEUROG1Q92886 237 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 Q96MF0 132 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 ZNF385AQ96PM9 386 aaKnown RBP16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 CPPED1Q9BRF8 314 aaPredicted RBP16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 TRIM2Q9C040 744 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 NPAP1Q9NZP6 1156 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 SLC25A15Q9Y619 301 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 PRR14LQ5THK1 2151 aa16.2■□□□□ 0.18
PRPF40A-209ENST00000486100 A0A0G2JND7 137 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 ELOA3DA6NLF2 546 aaPredicted RBP16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 ANGPT2O15123 496 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 SERPINB7O75635 380 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 AHSA1O95433 338 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 INHBBP09529 407 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 DANCRP0C864 163 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 RPS4XP62701 263 aaKnown RBP16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 EGR4Q05215 589 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 ELOA3BQ3SY89 546 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 C6orf89Q6UWU4 347 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 DHDDSQ86SQ9 333 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 RETREG3Q86VR2 466 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 COMTD1Q86VU5 262 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 HIPK4Q8NE63 616 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 BHLHE22Q8NFJ8 381 aaPredicted RBP16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 KBTBD8Q8NFY9 601 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 ELOA3Q8NG57 546 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 SMAP2Q8WU79 429 aaPredicted RBP16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 DNAJA4Q8WW22 397 aaPredicted RBP16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 ANKRD27Q96NW4 1050 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 CGREF1Q99674 301 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 BDH2Q9BUT1 245 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 PTDSS2Q9BVG9 487 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 AMBRA1Q9C0C7 1298 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 RASD1Q9Y272 281 aa16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 RAI1Q7Z5J4 1906 aaPredicted RBP16.19■□□□□ 0.18
PRPF40A-209ENST00000486100 ACANP16112 2415 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 ZFHX3Q15911 3703 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 ROS1P08922 2347 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 A0A1B0GWA3 101 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 FTCDNL1E5RQL4 147 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 SOD3P08294 240 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 HTR2AP28223 471 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 MPGP29372 298 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 TGFBR3Q03167 851 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 RBBP4Q09028 425 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 TMEM108Q6UXF1 575 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 CREB3L2Q70SY1 520 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 WDR31Q8NA23 367 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 POMGNT2Q8NAT1 580 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 C1orf162Q8NEQ5 155 aaPredicted RBP16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 SLC25A36Q96CQ1 311 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 KTI12Q96EK9 354 aaPredicted RBP16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 RADILQ96JH8 1075 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 SLCO5A1Q9H2Y9 848 aa16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 CISD1Q9NZ45 108 aaKnown RBP16.18■□□□□ 0.18
PRPF40A-209ENST00000486100 SETD2Q9BYW2 2564 aaPredicted RBP16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 A0A1W2PR80 420 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 SHISA9B4DS77 424 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 OVOL3O00110 214 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 ABCD4O14678 606 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 OR2T1O43869 369 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 MFN2O95140 757 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 PNMTP11086 282 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 PTAFRP25105 342 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 AQP1P29972 269 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms