RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 CA7P43166 264 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 FHITP49789 147 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 AP3M2P53677 418 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 CDH4P55283 916 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 KRT83P78385 493 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 IGLV3-21P80748 117 aaPredicted RBP3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 NME3Q13232 169 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 LTB4RQ15722 352 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 LYPLAL1Q5VWZ2 237 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 PAMR1Q6UXH9 720 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 CCDC65Q8IXS2 484 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 PARP8Q8N3A8 854 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 ATP6V0D2Q8N8Y2 350 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 FAM184AQ8NB25 1140 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 OR2AP1Q8NGE2 309 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 MR1Q95460 341 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 SNX21Q969T3 373 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 AGPAT4Q9NRZ5 378 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 GPR173Q9NS66 373 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 SAMSN1Q9NSI8 373 aaKnown RBP3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 ZNF319Q9P2F9 582 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 LHX3Q9UBR4 397 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 KCNK6Q9Y257 313 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 FARSAQ9Y285 508 aaKnown RBP3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 TMED7Q9Y3B3 224 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 CPAMD8Q8IZJ3 1885 aa3.3□□□□□ -1.88
SMARCC1-207ENST00000485833 DNAJC13O75165 2243 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 TSPAN11A1L157 253 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 ZNF487B1APH4 448 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 H7C0S8 307 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 KLRC4O43908 158 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 KLF7O75840 302 aaPredicted RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 RLN1P04808 185 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 OR9G9P0C7N8 305 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 VDRP11473 427 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 SKILP12757 684 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 ZNF19P17023 458 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 NELFEP18615 380 aaKnown RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 OR1E1P30953 314 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 CCR1P32246 355 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 GTF2H1P32780 548 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 RORAP35398 523 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 GP5P40197 560 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 IER3P46695 156 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 RPS15P62841 145 aaKnown RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 UBE2IP63279 158 aaKnown RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 GNA12Q03113 381 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 TFF3Q07654 80 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 CUL2Q13617 745 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 PYCR3Q53H96 274 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 ZNF789Q5FWF6 425 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 PNCKQ6P2M8 343 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 IYDQ6PHW0 289 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 TMEM270Q6UE05 265 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 TMEM64Q6YI46 380 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 ZNF730Q6ZMV8 503 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 ZNF600Q6ZNG1 722 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 HSD11B1LQ7Z5J1 315 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 SETD3Q86TU7 594 aaPredicted RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 ZSCAN30Q86W11 494 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 ZADH2Q8N4Q0 377 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 CHDHQ8NE62 594 aaPredicted RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 CKAP2Q8WWK9 683 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 GBP5Q96PP8 586 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 OR2M4Q96R27 311 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 MCCC1Q96RQ3 725 aaPredicted RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 CPXM1Q96SM3 734 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 NRTNQ99748 197 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 LLPHQ9BRT6 129 aaKnown RBP3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 AP1M1Q9BXS5 423 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 UCK2Q9BZX2 261 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 CD84Q9UIB8 345 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 SLC17A4Q9Y2C5 497 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 ETV7Q9Y603 341 aa3.29□□□□□ -1.88
SMARCC1-207ENST00000485833 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 MPDZO75970 2070 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 SLC19A2O60779 497 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 SCRG1O75711 98 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 IVLP07476 585 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 FHP07954 510 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 HOXC4P09017 264 aaPredicted RBP3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 SOAT1P35610 550 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 HMGN5P82970 282 aaKnown RBP3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 NCF4Q15080 339 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 CYTH1Q15438 398 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 IRGCQ6NXR0 463 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 CASC4Q6P4E1 433 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 ALKBH5Q6P6C2 394 aaKnown RBP3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 XKRXQ6PP77 449 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 IGFL2Q6UWQ7 119 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 LINC00696Q6ZRV3 163 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 FAM183BPQ6ZVS7 135 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 PRSS42Q7Z5A4 293 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 CCDC71Q8IV32 467 aaPredicted RBP3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 RPRMLQ8N4K4 120 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 SAMD12Q8N8I0 201 aa3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 ISG20Q96AZ6 181 aaKnown RBP3.28□□□□□ -1.88
SMARCC1-207ENST00000485833 NUS1Q96E22 293 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms