RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 DPY30Q9C005 99 aa10.59□□□□□ -0.71
SSR4-210ENST00000485612 C20orf27Q9GZN8 174 aa10.59□□□□□ -0.71
SSR4-210ENST00000485612 USP22Q9UPT9 525 aa10.59□□□□□ -0.71
SSR4-210ENST00000485612 SLC35A3Q9Y2D2 325 aa10.59□□□□□ -0.71
SSR4-210ENST00000485612 TMED7Q9Y3B3 224 aa10.59□□□□□ -0.71
SSR4-210ENST00000485612 HDGFL3Q9Y3E1 203 aa10.59□□□□□ -0.71
SSR4-210ENST00000485612 SPIN1Q9Y657 262 aaPredicted RBP10.59□□□□□ -0.71
SSR4-210ENST00000485612 NOTCH1P46531 2555 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 B4DSR2 109 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 ATP6V1G2-DDX39BF2Z307 99 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 HMGN4O00479 90 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 GPR171O14626 319 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 TYROBPO43914 113 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 CHRM4P08173 479 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 NUDT17P0C025 328 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 ARAFP10398 606 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 EPHA1P21709 976 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 UQCRC2P22695 453 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 KHKP50053 298 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 KCNJ10P78508 379 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 CCNIQ14094 377 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 CASP8Q14790 479 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 ATAD3BQ5T9A4 648 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 HOMEZQ8IX15 550 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 ARFGAP2Q8N6H7 521 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 ANKFN1Q8N957 763 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 NEURL3Q96EH8 262 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 TEX37Q96LM6 180 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 SLC38A1Q9H2H9 487 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 EXOSC3Q9NQT5 275 aaKnown RBP10.58□□□□□ -0.72
SSR4-210ENST00000485612 SLC17A5Q9NRA2 495 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 TMEM181Q9P2C4 612 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 MARCOQ9UEW3 520 aaPredicted RBP10.58□□□□□ -0.72
SSR4-210ENST00000485612 OSGIN1Q9UJX0 560 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 SPEF1Q9Y4P9 236 aa10.58□□□□□ -0.72
SSR4-210ENST00000485612 VWFP04275 2813 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 PRSS51A0A1B0GVH4 220 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 DNPH1O43598 174 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 GUSBP08236 651 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 HKR1P10072 659 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 ZFP36P26651 326 aaKnown RBP10.57□□□□□ -0.72
SSR4-210ENST00000485612 MAGEA8P43361 318 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 NME5P56597 212 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 VSNL1P62760 191 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 IFFO1Q0D2I5 559 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 CHI3L2Q15782 390 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 SMU1Q2TAY7 513 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 HIKESHIQ53FT3 197 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 AP1ARQ63HQ0 302 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 RNF130Q86XS8 419 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 NUDCD3Q8IVD9 361 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 TMEM186Q96B77 213 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 ZNF385AQ96PM9 386 aaKnown RBP10.57□□□□□ -0.72
SSR4-210ENST00000485612 SORT1Q99523 831 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 SLC35A5Q9BS91 424 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 RAB1BQ9H0U4 201 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 POLE3Q9NRF9 147 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.57□□□□□ -0.72
SSR4-210ENST00000485612 HIF1ANQ9NWT6 349 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 UPB1Q9UBR1 384 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 DCTN4Q9UJW0 460 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 PCDHGB4Q9UN71 923 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 MOKQ9UQ07 419 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 SLC9A8Q9Y2E8 581 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 GRIP1Q9Y3R0 1128 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 WNK2Q9Y3S1 2297 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 RYR3Q15413 4870 aa10.57□□□□□ -0.72
SSR4-210ENST00000485612 AGR2O95994 175 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 ALDOCP09972 364 aaKnown RBP10.56□□□□□ -0.72
SSR4-210ENST00000485612 DAOP14920 347 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 CDH2P19022 906 aaPredicted RBP10.56□□□□□ -0.72
SSR4-210ENST00000485612 TACR3P29371 465 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 CHI3L1P36222 383 aaPredicted RBP10.56□□□□□ -0.72
SSR4-210ENST00000485612 SERPINF1P36955 418 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 CDKN2CP42773 168 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 CLK1P49759 484 aaKnown RBP10.56□□□□□ -0.72
SSR4-210ENST00000485612 POLR2HP52434 150 aaKnown RBP10.56□□□□□ -0.72
SSR4-210ENST00000485612 SLC35A1P78382 337 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 SLC17A1Q14916 467 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 TRIP10Q15642 601 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 COX20Q5RI15 118 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 MRPL2Q5T653 305 aaKnown RBP10.56□□□□□ -0.72
SSR4-210ENST00000485612 OR7E24Q6IFN5 339 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 TMEM99Q8N816 258 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 ZDHHC22Q8N966 263 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 ZIC4Q8N9L1 334 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 PNPT1Q8TCS8 783 aaKnown RBP10.56□□□□□ -0.72
SSR4-210ENST00000485612 WDR60Q8WVS4 1066 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 OIT3Q8WWZ8 545 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 TESCQ96BS2 214 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 ZBTB9Q96C00 473 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 SUCNR1Q9BXA5 334 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 MED29Q9NX70 200 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 TRAPPC4Q9Y296 219 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 AMDHD2Q9Y303 409 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 NBEAL2Q6ZNJ1 2754 aa10.56□□□□□ -0.72
SSR4-210ENST00000485612 KLF11O14901 512 aa10.55□□□□□ -0.72
SSR4-210ENST00000485612 AKR7A3O95154 331 aa10.55□□□□□ -0.72
SSR4-210ENST00000485612 GSNP06396 782 aa10.55□□□□□ -0.72
SSR4-210ENST00000485612 GKN3PP0CG01 181 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms