RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 OR1L4Q8NGR5 311 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 OR2A1Q8NGT9 310 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 NT5CQ8TCD5 201 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 SLC44A1Q8WWI5 657 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 ZNF775Q96BV0 537 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-205ENST00000485055 WDR34Q96EX3 536 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 HARBI1Q96MB7 349 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 CPPED1Q9BRF8 314 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-205ENST00000485055 MCRIP2Q9BUT9 160 aaKnown RBP4.8□□□□□ -1.64
CCDC39-205ENST00000485055 RBM24Q9BX46 236 aaKnown RBP4.8□□□□□ -1.64
CCDC39-205ENST00000485055 OR10A5Q9H207 317 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 GSTO2Q9H4Y5 243 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 ACTL8Q9H568 366 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 ACTR5Q9H9F9 607 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-205ENST00000485055 INIPQ9NRY2 104 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 LNPEPQ9UIQ6 1025 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 SDK1Q7Z5N4 2213 aa4.8□□□□□ -1.64
CCDC39-205ENST00000485055 A0A1B0GX78 115 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 OR1F1O43749 312 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 BCAS1O75363 584 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 HEXAP06865 529 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SPP1P10451 314 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 CD22P20273 847 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 TYK2P29597 1187 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 GRIA3P42263 894 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 NPBWR1P48145 328 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 NUDT6P53370 316 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 PCBP3P57721 371 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 IL13RA1P78552 427 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 GUCY2DQ02846 1103 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 GRM7Q14831 915 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 CPSF6Q16630 551 aaKnown RBP eCLIP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 C18orf21Q32NC0 220 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 OR2A2Q6IF42 318 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 UGT3A1Q6NUS8 523 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 LCTLQ6UWM7 567 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 NRARPQ7Z6K4 114 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ZNF546Q86UE3 836 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SLC38A9Q8NBW4 561 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ABHD11Q8NFV4 315 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 OR2L3Q8NG85 312 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 PPP4R1Q8TF05 950 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 GTF2H4Q92759 462 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 MSI2Q96DH6 328 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 FBXO17Q96EF6 278 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ST6GALNAC5Q9BVH7 336 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ELOVL1Q9BW60 279 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 RLIMQ9NVW2 624 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 TINAGQ9UJW2 476 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ADAM21Q9UKJ8 722 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 STARD10Q9Y365 291 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 LRP12Q9Y561 859 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 KLF2Q9Y5W3 355 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 EPG5Q9HCE0 2579 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 GON4LQ3T8J9 2241 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SNRNP200O75643 2136 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 COL6A6A6NMZ7 2263 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 URB1O60287 2271 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 UBR5O95071 2799 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 NPIPA7E9PJI5 369 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 JRKO75564 520 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 RPP14O95059 124 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 UMODP07911 640 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 FURINP09958 794 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 OR4E1P0C645 316 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 NPIPA8P0DM63 369 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SMIM10L1P0DMW3 83 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 TCP1P17987 556 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 PGAM1P18669 254 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 CFHR2P36980 270 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SRSF6Q13247 344 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 DUPD1Q68J44 220 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 C8orf86Q6ZUL3 223 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 CENPUQ71F23 418 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 FUNDC1Q8IVP5 155 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SLC34A3Q8N130 599 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 PLPP5Q8NEB5 264 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ACOT11Q8WXI4 607 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SMPDL3AQ92484 453 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 EXTL1Q92935 676 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 NTNG2Q96CW9 530 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SMIM10Q96HG1 83 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 FAR2Q96K12 515 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 MARK4Q96L34 752 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 FEVQ99581 238 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 MRI1Q9BV20 369 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SLC2A8Q9NY64 477 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 TFR2Q9UP52 801 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 SLC22A7Q9Y694 548 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 URGCP-MRPS24S4R325 110 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 CENPBD1B2RD01 187 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ZSCAN12O43309 604 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ZNF749O43361 778 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 CRYGBP07316 175 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 RPS17P08708 135 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 PSKH1P11801 424 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 ITGA3P26006 1051 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 RPL10P27635 214 aaKnown RBP4.79□□□□□ -1.64
CCDC39-205ENST00000485055 OR3A1P47881 315 aa4.79□□□□□ -1.64
CCDC39-205ENST00000485055 PPT1P50897 306 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms