RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CD97P48960 835 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 PSMD7P51665 324 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC16A1P53985 500 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 WNT4P56705 351 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC26A5P58743 744 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 ARPC4P59998 168 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 CBX3Q13185 183 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 TRA2AQ13595 282 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZNF791Q3KP31 576 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 THOC7Q6I9Y2 204 aaKnown RBP8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 MEPCEQ7L2J0 689 aaKnown RBP8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 NAXDQ8IW45 347 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 C7orf57Q8NEG2 295 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 OR9Q1Q8NGQ5 310 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 NUBPLQ8TB37 319 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 OIT3Q8WWZ8 545 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 MR1Q95460 341 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 TAAR8Q969N4 342 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 TBX5Q99593 518 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 FN3KQ9H479 309 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 RERGLQ9H628 205 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 TMEM9BQ9NQ34 198 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 KLHL1Q9NR64 748 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 FBXO8Q9NRD0 319 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 ERVK13-1Q9NX77 482 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 H2AFY2Q9P0M6 372 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 MYOTQ9UBF9 498 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 ITGB1BP2Q9UKP3 347 aa8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 PAIP2BQ9ULR5 123 aaKnown RBP8.04□□□□□ -1.12
CDC42SE1-204ENST00000483763 COL27A1Q8IZC6 1860 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 LINC00854A0A1B0GVQ3 168 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 PRR23D1E9PI22 279 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 CDC40O60508 579 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 PPM1BO75688 479 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 GP1BAP07359 652 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 MRPL3P09001 348 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ASAH2BP0C7U1 165 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 PRR23D2P0DMB1 279 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC6A6P31641 620 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 IDUAP35475 653 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ATP6V1E1P36543 226 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 RPS5P46782 204 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 HCCSP53701 268 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ERVK-25P63136 954 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 MLLT11Q13015 90 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 DCTN2Q13561 401 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 INPP5JQ15735 1006 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 MOGQ16653 247 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 LYPD8Q6UX82 237 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 BPHLQ86WA6 291 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 MARCH9Q86YJ5 346 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 TMEM99Q8N816 258 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 GALNT6Q8NCL4 622 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 OR5W2Q8NH69 310 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 GPR119Q8TDV5 335 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 MED12Q93074 2177 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 RASD2Q96D21 266 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 DCLRE1CQ96SD1 692 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 NMNAT3Q96T66 252 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 DDOQ99489 341 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 TM9SF2Q99805 663 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ARHGAP9Q9BRR9 750 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 TMEM43Q9BTV4 400 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 CDADC1Q9BWV3 514 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC19A3Q9BZV2 496 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 RACGAP1Q9H0H5 632 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 NRIP3Q9NQ35 241 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 NANSQ9NR45 359 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 NDUFB11Q9NX14 153 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 SLC39A1Q9NY26 324 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 TNFRSF10DQ9UBN6 386 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZNF337Q9Y3M9 751 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 SPIN1Q9Y657 262 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 OR6C68A6NDL8 312 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 RIIAD1A6NNX1 92 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 PLD2O14939 933 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 F13BP05160 661 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 KLK3P07288 261 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 CPEP16870 476 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ENDOUP21128 410 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 LCN1P31025 176 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 RPL4P36578 427 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 TGM4P49221 684 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 NRG3P56975 720 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 C1DQ13901 141 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 INSL4Q14641 139 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 PCOLCEQ15113 449 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 QPRTQ15274 297 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 CSRP2Q16527 193 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 COL28A1Q2UY09 1125 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 STPG1Q5TH74 334 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 LYPD4Q6UWN0 246 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 CCBE1Q6UXH8 406 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ADGRG3Q86Y34 549 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 RFLNBQ8N5W9 214 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 C10orf53Q8N6V4 93 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 LRRC75AQ8NAA5 344 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 NPEPL1Q8NDH3 523 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 HGDQ93099 445 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms