RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CCDC182A6NF36 153 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 TNFSF15O95150 251 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 TXNDC12O95881 172 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 IGHA1P01876 353 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 CD14P08571 375 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 ZNF3P17036 446 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 OTX2P32243 289 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 AQP2P41181 271 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 ETV1P50549 477 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 MAP2K6P52564 334 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 LIMK1P53667 647 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 NFATC3Q12968 1075 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 CRMP1Q14194 572 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 SPHARQ15513 63 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 C1QL3Q5VWW1 255 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 FAM122BQ7Z309 247 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 FADS6Q8N9I5 356 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 KISS1RQ969F8 398 aaPredicted RBP12.73□□□□□ -0.37
CLK3-204ENST00000483723 TEAD3Q99594 435 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 MND1Q9BWT6 205 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 METTL7AQ9H8H3 244 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 MED20Q9H944 212 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 PPP4R1LQ9P1A2 415 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 OTOGLQ3ZCN5 2332 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 WDFY4Q6ZS81 3184 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 A0A1W2PPW3 197 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 VGLL3A8MV65 326 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 AHCYL1O43865 530 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 RAD1O60671 282 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 LIMS3P0CW19 117 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 LIMS4P0CW20 117 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 HIST1H1CP16403 213 aaKnown RBP12.72□□□□□ -0.37
CLK3-204ENST00000483723 RPS5P46782 204 aaKnown RBP12.72□□□□□ -0.37
CLK3-204ENST00000483723 RGS6P49758 472 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 SSR4P51571 173 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 PAQR6Q6TCH4 344 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 IGFN1Q86VF2 1251 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 GALNT15Q8N3T1 639 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 ZNF485Q8NCK3 441 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 OR2M3Q8NG83 312 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 PAQR8Q8TEZ7 354 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 ASB15Q8WXK1 588 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 OPALINQ96PE5 141 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 NPAS1Q99742 590 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 ANGPTL4Q9BY76 406 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 PROK2Q9HC23 129 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 ISYNA1Q9NPH2 558 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 P4HTMQ9NXG6 502 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 FBXL4Q9UKA2 621 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 PIEZO1Q92508 2521 aa12.72□□□□□ -0.37
CLK3-204ENST00000483723 SLC22A31A6NKX4 558 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 BLOC1S5-TXNDC5H3BN57 136 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 ZNF208O43345 1280 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 FZD7O75084 574 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 SLC25A12O75746 678 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 SCG5P05408 212 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 SERPINA7P05543 415 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 FTH1P19P0C7X4 201 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 NOS3P29474 1203 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 RPL4P36578 427 aaKnown RBP12.71□□□□□ -0.37
CLK3-204ENST00000483723 DLSTP36957 453 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLK3-204ENST00000483723 MED22Q15528 200 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 PLPPR5Q32ZL2 321 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 GXYLT1Q4G148 440 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 FAM69AQ5T7M9 428 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 C1orf140Q5VVS0 124 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 FCRLBQ6BAA4 426 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 ARSKQ6UWY0 536 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 IL20RBQ6UXL0 311 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 C10orf53Q8N6V4 93 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 WDSUB1Q8N9V3 476 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 NPEPL1Q8NDH3 523 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 PSD4Q8NDX1 1056 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 OR4F15Q8NGB8 312 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 OR52E2Q8NGJ4 325 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 ADAMTS17Q8TE56 1095 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 MRGPRX4Q96LA9 322 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 KATNB1Q9BVA0 655 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 NMNAT2Q9BZQ4 307 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 ADAM18Q9Y3Q7 739 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 EML6Q6ZMW3 1958 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 FRYLO94915 3013 aa12.71□□□□□ -0.37
CLK3-204ENST00000483723 LOC101059948A0A1B0GTJ6 334 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 ANKRD33BA6NCL7 494 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.71□□□□□ -0.38
CLK3-204ENST00000483723 FTCDNL1E5RQL4 147 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 PROB1E7EW31 1015 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 MASP2O00187 686 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 SLC22A1O15245 554 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 OR2T1O43869 369 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.38
CLK3-204ENST00000483723 HIST1H2ABP04908 130 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 MYL12AP19105 171 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 PAICSP22234 425 aaKnown RBP12.71□□□□□ -0.38
CLK3-204ENST00000483723 NR4A1P22736 598 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 CTXN1P60606 82 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 ERVK-25P63136 954 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 RPL18Q07020 188 aaKnown RBP12.71□□□□□ -0.38
CLK3-204ENST00000483723 MLLT11Q13015 90 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms