RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 SLC17A1Q14916 467 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 PGGHGQ32M88 737 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 GLIPR1L2Q4G1C9 344 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 LRIF1Q5T3J3 769 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 C1orf140Q5VVS0 124 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 PRAMEF8Q5VWM4 474 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 PRAMEF7Q5VXH5 474 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 MAPK1IP1LQ8NDC0 245 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 OR9K2Q8NGE7 335 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 RNF217Q8TC41 542 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 SLC25A36Q96CQ1 311 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 ALKBH3Q96Q83 286 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-212ENST00000482251 CCDC28BQ9BUN5 200 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 RSPO3Q9BXY4 272 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-212ENST00000482251 ARMC7Q9H6L4 198 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 NPHS2Q9NP85 383 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 THUMPD1Q9NXG2 353 aaKnown RBP9.21□□□□□ -0.94
CPSF4-212ENST00000482251 SEC14L4Q9UDX3 406 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 DCTN4Q9UJW0 460 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 POU2F3Q9UKI9 436 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 ZNF232Q9UNY5 417 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 SLC25A15Q9Y619 301 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 CADP27708 2225 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 ELOA3DA6NLF2 546 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-212ENST00000482251 A8MVM7 634 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 HMGB1P1B2RPK0 211 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-212ENST00000482251 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 NDUFS7O75251 213 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 AHSA1O95433 338 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 HEXAP06865 529 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 BMP2P12643 396 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 CBLP22681 906 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 HTR2AP28223 471 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 MRPL19P49406 292 aaKnown RBP9.2□□□□□ -0.94
CPSF4-212ENST00000482251 CDK6Q00534 326 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 SF3A3Q12874 501 aaKnown RBP eCLIP9.2□□□□□ -0.946e-9■■■■□ 25.3
CPSF4-212ENST00000482251 SCARB2Q14108 478 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 GABRA6Q16445 453 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 ELOA3BQ3SY89 546 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 SLC22A25Q6T423 547 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 PRSS57Q6UWY2 283 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 B3GLCTQ6Y288 498 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 AAED1Q7RTV5 226 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 HDXQ7Z353 690 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 KDM8Q8N371 416 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 ZIC4Q8N9L1 334 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 ELOA3Q8NG57 546 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 HTRA1Q92743 480 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
CPSF4-212ENST00000482251 CPPED1Q9BRF8 314 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-212ENST00000482251 BDH2Q9BUT1 245 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 SLCO5A1Q9H2Y9 848 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 ALG2Q9H553 416 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 BCL2L10Q9HD36 194 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 SLC52A3Q9NQ40 469 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 ZNF701Q9NV72 531 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-212ENST00000482251 CISD1Q9NZ45 108 aaKnown RBP9.2□□□□□ -0.94
CPSF4-212ENST00000482251 RPS6KB2Q9UBS0 482 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 GDF2Q9UK05 429 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-212ENST00000482251 IFT52Q9Y366 437 aa9.2□□□□□ -0.94
CPSF4-212ENST00000482251 TRBV5-3A0A0A0MS03 114 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 A0A1B0GWA3 101 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 PDLIM1O00151 329 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 TPST1O60507 370 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 KRT33AO76009 404 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 OPN1SWP03999 348 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 PNMTP11086 282 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 ETS2P15036 469 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 CD40P25942 277 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 GTF2E2P29084 291 aaKnown RBP9.19□□□□□ -0.94
CPSF4-212ENST00000482251 PCSK6P29122 969 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 SELENOPP49908 381 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 P2RY4P51582 365 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 MAP2K6P52564 334 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 MTPNP58546 118 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 NCALDP61601 193 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 IL1RL1Q01638 556 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 EGR4Q05215 589 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 TNK1Q13470 666 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 SELPLGQ14242 412 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 CLEC12BQ2HXU8 276 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 HIKESHIQ53FT3 197 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 TMEM225Q6GV28 225 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 REEP3Q6NUK4 255 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 NIPAL3Q6P499 406 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 TMEM108Q6UXF1 575 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 DHDDSQ86SQ9 333 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 P2RY8Q86VZ1 359 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 CKAP2Q8WWK9 683 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 TMEM45BQ96B21 275 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 KTI12Q96EK9 354 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-212ENST00000482251 MAGEB18Q96M61 343 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 TRAF4Q9BUZ4 470 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-212ENST00000482251 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 ARGLU1Q9NWB6 273 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-212ENST00000482251 ABCA2Q9BZC7 2435 aa9.19□□□□□ -0.94
CPSF4-212ENST00000482251 A0A0G2JND7 137 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 FTCDNL1E5RQL4 147 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 E7EQL1 145 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms