RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 C1QL2Q7Z5L3 287 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PIM3Q86V86 326 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 SFTPA2Q8IWL1 248 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MMD2Q8IY49 270 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 Q8N402 240 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 GCSAMQ8N6F7 178 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 EMC1Q8N766 993 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ACBD4Q8NC06 268 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 OR1B1Q8NGR6 318 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 OR2V1Q8NHB1 315 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 DYNC2LI1Q8TCX1 351 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MRAPQ8TCY5 172 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 CXorf40AQ8TE69 158 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PHF10Q8WUB8 498 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 FAM172AQ8WUF8 416 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 LZICQ8WZA0 190 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 WDR34Q96EX3 536 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 CELF6Q96J87 481 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 UHRF2Q96PU4 802 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MAPKAP1Q9BPZ7 522 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 TRIM15Q9C019 465 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 NPFFR1Q9GZQ6 430 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 LAT2Q9GZY6 243 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ILKAPQ9H0C8 392 aaPredicted RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 PORCNQ9H237 461 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 EGLN3Q9H6Z9 239 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MARCH7Q9H992 704 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 KRCC1Q9NPI7 259 aaPredicted RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 PARVAQ9NVD7 372 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 THUMPD1Q9NXG2 353 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 POMT2Q9UKY4 750 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PADI3Q9ULW8 664 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ICAM5Q9UMF0 924 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 NDRG2Q9UN36 371 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 ZNF175Q9Y473 711 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 OR1A2Q9Y585 309 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ETV7Q9Y603 341 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 CSNK1G3Q9Y6M4 447 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 CDH10Q9Y6N8 788 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MYH14Q7Z406 1995 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 OR2M5A3KFT3 312 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 SAGE2PA6NJ88 616 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ZNF729A6NN14 1252 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 SLC9A3R1O14745 358 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 PPP1R2P9O14990 202 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 MAGEB4O15481 346 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 MLNRO43193 412 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PRKAB2O43741 272 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 SNX3O60493 162 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 TPST2O60704 377 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 RAMP3O60896 148 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 DIRAS1O95057 198 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 FARS2O95363 451 aaKnown RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 CLDN9O95484 217 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 RAF1P04049 648 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 GSTA2P09210 222 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 HOXC6P09630 235 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ADORA3P0DMS8 318 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CT45A8P0DMV1 189 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CT45A9P0DMV2 189 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ICAM2P13598 275 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 UQCRBP14927 111 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 MAOAP21397 527 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 TBXA2RP21731 343 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CHATP28329 748 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 C21orf33P30042 268 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 PIGAP37287 484 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CSKP41240 450 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 SLC1A1P43005 524 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 NR4A2P43354 598 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 BRCC3P46736 316 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 GLUD2P49448 558 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PRLHRP49683 370 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CRISP1P54107 249 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PSPHP78330 225 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CCL7P80098 99 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 MRPS22P82650 360 aaKnown RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 AESQ08117 197 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 C2orf80Q0P641 193 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PLA2G7Q13093 441 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 DPYSL3Q14195 570 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PON3Q15166 354 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PRTGQ2VWP7 1150 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 VPS26BQ4G0F5 336 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ACSF3Q4G176 576 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 TP53I3Q53FA7 332 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CT45A2Q5DJT8 189 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 TIMM23BQ5SRD1 257 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 IDNKQ5T6J7 187 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 HES5Q5TA89 166 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 OTUD1Q5VV17 481 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 C1orf146Q5VVC0 180 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 FAM109BQ6ICB4 259 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 RTL6Q6ICC9 239 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ADAM5Q6NVV9 412 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 SPESP1Q6UW49 350 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ENPP6Q6UWR7 440 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 USP43Q70EL4 1123 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ZNF367Q7RTV3 350 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 UNC93AQ86WB7 457 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms