RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 WBP2NLQ6ICG8 309 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 OR7E24Q6IFN5 339 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 KLHL17Q6TDP4 642 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 EPGNQ6UW88 154 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 MSANTD1Q6ZTZ1 278 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 SSX8Q7RTT4 187 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 AAED1Q7RTV5 226 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 GPAT4Q86UL3 456 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 OR9K2Q8NGE7 335 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 HTRA1Q92743 480 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 HS6ST2Q96MM7 605 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 SPATA9Q9BWV2 254 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 SLC17A5Q9NRA2 495 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 DNHD1Q96M86 4753 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 A0A0G2JPF8 293 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 AQP7P3A6NL99 342 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 HNRNPCL2B2RXH8 293 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 HNRNPCL3B7ZW38 293 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 KLF11O14901 512 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 SSX4O60224 188 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 HNRNPCL1O60812 293 aaKnown RBP16.27■□□□□ 0.2
CLK1-211ENST00000481641 ERLIN1O75477 346 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 HNRNPCL4P0DMR1 293 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 PTAFRP25105 342 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 TTKP33981 857 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 P2RY4P51582 365 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 MAP2K6P52564 334 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 IRX1P78414 480 aaPredicted RBP16.27■□□□□ 0.2
CLK1-211ENST00000481641 RGNQ15493 299 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 ETFDHQ16134 617 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 ZNF311Q5JNZ3 666 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 AGAP6Q5VW22 663 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 TMEM45BQ96B21 275 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 C3orf49Q96BT1 292 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 RADILQ96JH8 1075 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 DHRS9Q9BPW9 319 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 CACNG6Q9BXT2 260 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 RSPO3Q9BXY4 272 aaPredicted RBP16.27■□□□□ 0.2
CLK1-211ENST00000481641 AMBRA1Q9C0C7 1298 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 FAIMQ9NVQ4 179 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 DCTN4Q9UJW0 460 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 ZNF232Q9UNY5 417 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 MGAT4BQ9UQ53 548 aa16.27■□□□□ 0.2
CLK1-211ENST00000481641 A8MVM7 634 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 CLIC1O00299 241 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 HOXB9P17482 250 aaPredicted RBP16.26■□□□□ 0.19
CLK1-211ENST00000481641 FABP6P51161 128 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 C1orf140Q5VVS0 124 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 TMEM225Q6GV28 225 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 C11orf71Q6IPW1 123 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 DNM1P46Q6ZS02 220 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 EBF4Q9BQW3 602 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 TAPBPLQ9BX59 468 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 GRIP2Q9C0E4 1043 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 SLCO1B3Q9NPD5 702 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 SLAMF8Q9P0V8 285 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 ADAM21Q9UKJ8 722 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 ATP23Q9Y6H3 246 aa16.26■□□□□ 0.19
CLK1-211ENST00000481641 TMEM247A6NEH6 219 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 MPGP29372 298 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 SELENOPP49908 381 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 HIKESHIQ53FT3 197 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 FUNDC1Q8IVP5 155 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 MSRB3Q8IXL7 192 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 FBXL14Q8N1E6 418 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 C10orf111Q8N326 155 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 MUC15Q8N387 334 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 SF3B5Q9BWJ5 86 aaKnown RBP16.25■□□□□ 0.19
CLK1-211ENST00000481641 A4GALTQ9NPC4 353 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 CBLN4Q9NTU7 201 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 SLC25A37Q9NYZ2 338 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 IFT52Q9Y366 437 aa16.25■□□□□ 0.19
CLK1-211ENST00000481641 TMEM229AB2RXF0 380 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 NPIPB7O75200 414 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 IDH3AP50213 366 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 AGBL2Q5U5Z8 902 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 CREB3L2Q70SY1 520 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 COMTD1Q86VU5 262 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 DEPDC4Q8N2C3 294 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 KDM8Q8N371 416 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 C1orf162Q8NEQ5 155 aaPredicted RBP16.24■□□□□ 0.19
CLK1-211ENST00000481641 SLC25A36Q96CQ1 311 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 CACYBPQ9HB71 228 aaKnown RBP16.24■□□□□ 0.19
CLK1-211ENST00000481641 BCL2L10Q9HD36 194 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 TCF7L2Q9NQB0 619 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 THUMPD1Q9NXG2 353 aaKnown RBP16.24■□□□□ 0.19
CLK1-211ENST00000481641 SEC14L4Q9UDX3 406 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 AMDHD2Q9Y303 409 aa16.24■□□□□ 0.19
CLK1-211ENST00000481641 IGHV4-30-2A0A087WSY4 118 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 A0A096LPI6 279 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 ATP6V1G2-DDX39BF2Z307 99 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 NR5A2O00482 541 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 POLR3GO15318 223 aaPredicted RBP16.23■□□□□ 0.19
CLK1-211ENST00000481641 KRT33AO76009 404 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 LGI1O95970 557 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 BMP2P12643 396 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 RPS5P46782 204 aaKnown RBP16.23■□□□□ 0.19
CLK1-211ENST00000481641 NUDT6P53370 316 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 PRPS1P60891 318 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 STX1BP61266 288 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms