RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 MAD2L1Q13257 205 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 HIKESHIQ53FT3 197 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 PAQR6Q6TCH4 344 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 KLHL24Q6TFL4 600 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 THSD4Q6ZMP0 1018 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 ZIC4Q8N9L1 334 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 OR9K2Q8NGE7 335 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 ZNF418Q8TF45 676 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 TMEM45BQ96B21 275 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 PPP1R36Q96LQ0 422 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 NAA11Q9BSU3 229 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 RBM4Q9BWF3 364 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 LGALS13Q9UHV8 139 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 PCDHGB4Q9UN71 923 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 TMED7Q9Y3B3 224 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 FKBP7Q9Y680 259 aa8.2□□□□□ -1.1
SMARCE1-210ENST00000481231 IGHV1-18A0A0C4DH31 117 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 AGAP5A6NIR3 686 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 LIPT2A6NK58 231 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 HMGN4O00479 90 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 ZNF208O43345 1280 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 WNT11O96014 354 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 CHRM4P08173 479 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 NUDT17P0C025 328 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 CDH2P19022 906 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 ZFP36P26651 326 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 APEX1P27695 318 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 CHI3L1P36222 383 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 SLC1A3P43003 542 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 PRPS1P60891 318 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 SNRPD2P62316 118 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 CASP8Q14790 479 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 SMU1Q2TAY7 513 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 GPAT3Q53EU6 434 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 SPANXN4Q5MJ08 99 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 C1QTNF12Q5T7M4 302 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 ANXA8L1Q5VT79 327 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 DEF8Q6ZN54 512 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 SLC46A3Q7Z3Q1 461 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 RNF130Q86XS8 419 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 SVOPLQ8N434 492 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 RIBC1Q8N443 379 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 ANKS4BQ8N8V4 417 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 ANKFN1Q8N957 763 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 LINC01356Q8N9X3 169 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 POMGNT2Q8NAT1 580 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 PMM1Q92871 262 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 MRPL24Q96A35 216 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 TESCQ96BS2 214 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 DDIT4LQ96D03 193 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 PKNOX2Q96KN3 472 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 ZNF385AQ96PM9 386 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 TRNT1Q96Q11 434 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 SLC35A5Q9BS91 424 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 DPY30Q9C005 99 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 SLC38A1Q9H2H9 487 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 MARCOQ9UEW3 520 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 PCDHB10Q9UN67 800 aa8.19□□□□□ -1.1
SMARCE1-210ENST00000481231 LOC390937A0A1W2PQ73 354 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 AQP7P3A6NL99 342 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 FAAHO00519 579 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 ITM2AO43736 263 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 AKR7A3O95154 331 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 LGI1O95970 557 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 ARAFP10398 606 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 RPS4Y1P22090 263 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 SERPINF1P36955 418 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 ETV4P43268 484 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 MAP2K6P52564 334 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 CDH15P55291 814 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 EPS8Q12929 822 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 CEACAM7Q14002 265 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 CCNIQ14094 377 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 OR7A5Q15622 319 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 ADIPOQQ15848 244 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 SYPL1Q16563 259 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 OTUD3Q5T2D3 398 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 MRPL2Q5T653 305 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 AAED1Q7RTV5 226 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 SPATA19Q7Z5L4 167 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 CMIPQ8IY22 773 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 TMEM99Q8N816 258 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 ZNF781Q8N8C0 355 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 VPS37AQ8NEZ2 397 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 AURKBQ96GD4 344 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 BOD1Q96IK1 185 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 CCDC115Q96NT0 180 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 ZIM3Q96PE6 472 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 SLC38A2Q96QD8 506 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 SNX18Q96RF0 628 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 VRK1Q99986 396 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 OBP2BQ9NPH6 170 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 CA10Q9NS85 328 aa8.18□□□□□ -1.1
SMARCE1-210ENST00000481231 WNK1Q9H4A3 2382 aa8.17□□□□□ -1.1
SMARCE1-210ENST00000481231 B9A039 149 aa8.17□□□□□ -1.1
SMARCE1-210ENST00000481231 ZNF587BE7ETH6 402 aa8.17□□□□□ -1.1
SMARCE1-210ENST00000481231 E9PBE3 544 aa8.17□□□□□ -1.1
SMARCE1-210ENST00000481231 TYROBPO43914 113 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms