RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 DEFB127Q9H1M4 99 aa15.83■□□□□ 0.12
UPF3A-206ENST00000480362 ADNPQ9H2P0 1102 aa15.83■□□□□ 0.12
UPF3A-206ENST00000480362 MCCC2Q9HCC0 563 aa15.83■□□□□ 0.12
UPF3A-206ENST00000480362 TBC1D23Q9NUY8 699 aa15.83■□□□□ 0.12
UPF3A-206ENST00000480362 IL20RAQ9UHF4 553 aa15.83■□□□□ 0.12
UPF3A-206ENST00000480362 SLC6A5Q9Y345 797 aa15.83■□□□□ 0.12
UPF3A-206ENST00000480362 CNTRLQ7Z7A1 2325 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 FTCDNL1E5RQL4 147 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 LINC01387J3KSC0 135 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 BMP7P18075 431 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 MYF6P23409 242 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 GRPRP30550 384 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 GGT2P36268 569 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 GIPRP48546 466 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 STARP49675 285 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 TPD52P55327 224 aaPredicted RBP15.82■□□□□ 0.12
UPF3A-206ENST00000480362 GFRA1P56159 465 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 CDK5Q00535 292 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 MYBPHQ13203 477 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 MED21Q13503 144 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 OR7A5Q15622 319 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 CLEC12AQ5QGZ9 265 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 SLX4IPQ5VYV7 408 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 RPL13AP3Q6NVV1 102 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 SMARCD3Q6STE5 483 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 CHERPQ8IWX8 916 aaKnown RBP15.82■□□□□ 0.12
UPF3A-206ENST00000480362 IQCF1Q8N6M8 205 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 SMPDL3BQ92485 455 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 CRELD1Q96HD1 420 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 ARHGAP9Q9BRR9 750 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 ASPNQ9BXN1 380 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 SLC6A15Q9H2J7 730 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 ACKR4Q9NPB9 350 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 HDGFL3Q9Y3E1 203 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 MPDZO75970 2070 aa15.82■□□□□ 0.12
UPF3A-206ENST00000480362 LIPT2A6NK58 231 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 GJE1A6NN92 205 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 BLOC1S5-TXNDC5H3BN57 136 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 NDUFB2O95178 105 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 AQP2P41181 271 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 NUP107P57740 925 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 OR2B6P58173 313 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 C19orf57Q0VDD7 668 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 IL18R1Q13478 541 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 MFSD13AQ14CX5 517 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 PLEKHN1Q494U1 663 aaPredicted RBP15.81■□□□□ 0.12
UPF3A-206ENST00000480362 ANKDD1AQ495B1 522 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 GXYLT1Q4G148 440 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 ZNF691Q5VV52 312 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 ACSM5Q6NUN0 579 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 THSD4Q6ZMP0 1018 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 NANOGNBQ7Z5D8 188 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 C8orf59Q8N0T1 100 aaPredicted RBP15.81■□□□□ 0.12
UPF3A-206ENST00000480362 OR52L1Q8NGH7 329 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 OR5J2Q8NH18 312 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 MOSPD2Q8NHP6 518 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 ZDHHC11Q9H8X9 412 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 SLC25A19Q9HC21 320 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 B3GNT3Q9Y2A9 372 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 LRCH1Q9Y2L9 728 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 HIF3AQ9Y2N7 669 aa15.81■□□□□ 0.12
UPF3A-206ENST00000480362 FREM3P0C091 2139 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 A0A0J9YW62 118 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 M0R082 166 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 SULT2B1O00204 365 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 TFECO14948 347 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 FAM87AP0C7U9 286 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 ZNF24P17028 368 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 GTF2E2P29084 291 aaKnown RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 SLC6A6P31641 620 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 SMSP52788 366 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 PRPS1P60891 318 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 RPS4XP62701 263 aaKnown RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 PMS2P3Q13401 168 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 CMPK2Q5EBM0 449 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 C12orf73Q69YU5 71 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 RPUSD3Q6P087 351 aaKnown RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 SLC27A4Q6P1M0 643 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 TMPPEQ6ZT21 453 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 CCDC71Q8IV32 467 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 MARVELD2Q8N4S9 558 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 OR4Q3Q8NH05 313 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 C9orf43Q8TAL5 461 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 ZNF417Q8TAU3 575 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 KLHL15Q96M94 604 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 ZNF587Q96SQ5 575 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 APOL4Q9BPW4 351 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 IFT27Q9BW83 186 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 LDAHQ9H6V9 325 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 ZNF71Q9NQZ8 489 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 ALKBH4Q9NXW9 302 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 MRPL39Q9NYK5 338 aaKnown RBP15.8■□□□□ 0.12
UPF3A-206ENST00000480362 TAS2R5Q9NYW4 299 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 UBAP1Q9NZ09 502 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 SEC14L4Q9UDX3 406 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 TRAPPC4Q9Y296 219 aa15.8■□□□□ 0.12
UPF3A-206ENST00000480362 TSPAN19P0C672 248 aa15.79■□□□□ 0.12
UPF3A-206ENST00000480362 POU3F2P20265 443 aaPredicted RBP15.79■□□□□ 0.12
UPF3A-206ENST00000480362 UQCRC1P31930 480 aa15.79■□□□□ 0.12
UPF3A-206ENST00000480362 DIO1P49895 249 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms