RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 IDO1P14902 403 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 NCF2P19878 526 aaPredicted RBP5.85□□□□□ -1.47
FN1-220ENST00000480024 CXCR1P25024 350 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 MPGP29372 298 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 MVDP53602 400 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 CRISP3P54108 245 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 WDR4P57081 412 aaKnown RBP5.85□□□□□ -1.47
FN1-220ENST00000480024 DSTNP60981 165 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 COPZ1P61923 177 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 TGFBR3Q03167 851 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 LGALS3BPQ08380 585 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 LRRC74AQ0VAA2 488 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 RAB35Q15286 201 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 MAPK11Q15759 364 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 SLC9B1Q4ZJI4 515 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 PDCD4Q53EL6 469 aaKnown RBP5.85□□□□□ -1.47
FN1-220ENST00000480024 HIKESHIQ53FT3 197 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 TNFAIP8L3Q5GJ75 292 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 C6orf10Q5SRN2 563 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 AP1ARQ63HQ0 302 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 MAVSQ7Z434 540 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 ZNF440Q8IYI8 595 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 C17orf78Q8N4C9 275 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 GLB1L3Q8NCI6 653 aaPredicted RBP5.85□□□□□ -1.47
FN1-220ENST00000480024 C1orf162Q8NEQ5 155 aaPredicted RBP5.85□□□□□ -1.47
FN1-220ENST00000480024 OR9K2Q8NGE7 335 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 OR9I1Q8NGQ6 314 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 OR52P1PQ8NH57 321 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 VPS33AQ96AX1 596 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 TMEM45BQ96B21 275 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 TMEM19Q96HH6 336 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 MUS81Q96NY9 551 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 ZNF385AQ96PM9 386 aaKnown RBP5.85□□□□□ -1.47
FN1-220ENST00000480024 REPIN1Q9BWE0 567 aaKnown RBP5.85□□□□□ -1.47
FN1-220ENST00000480024 TAPBPLQ9BX59 468 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 MTHFD2LQ9H903 347 aaPredicted RBP5.85□□□□□ -1.47
FN1-220ENST00000480024 FKRPQ9H9S5 495 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 THAP1Q9NVV9 213 aa5.85□□□□□ -1.47
FN1-220ENST00000480024 A0A096LNT2 108 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 TMEM247A6NEH6 219 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 A8MV72 311 aaPredicted RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 A8MVM7 634 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 ZNF587BE7ETH6 402 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 H7C417 338 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 LGI1O95970 557 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 WNT11O96014 354 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 NUDT7P0C024 238 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 ZNF16P17020 682 aaPredicted RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 ACAA2P42765 397 aaKnown RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 SELENOPP49908 381 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 P2RY4P51582 365 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 MAP2K6P52564 334 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 PRPS1P60891 318 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 TUBA1BP68363 451 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 TUBA4AP68366 448 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 HOXC5Q00444 222 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 LARS2Q15031 903 aaKnown RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 GSTA3Q16772 222 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 TMEM249Q2WGJ8 235 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 C6orf52Q5T4I8 152 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 RNF220Q5VTB9 566 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 C1orf140Q5VVS0 124 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 PRAMEF8Q5VWM4 474 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 PRAMEF7Q5VXH5 474 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 ATG16L1Q676U5 607 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 TMEM225Q6GV28 225 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 WBP2NLQ6ICG8 309 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 HMBOX1Q6NT76 420 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 ZNF544Q6NX49 715 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 NIPAL3Q6P499 406 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 TUBA1AQ71U36 451 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 ABHD12BQ7Z5M8 362 aaPredicted RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 CROCCP2Q86T23 111 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 SERPINA11Q86U17 422 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 CLIP4Q8N3C7 705 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 ZIC4Q8N9L1 334 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 POMGNT2Q8NAT1 580 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 SLC38A5Q8WUX1 472 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 NANOS1Q8WY41 292 aaKnown RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 FAM168AQ92567 244 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 MAL2Q969L2 176 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 C3orf49Q96BT1 292 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 FBXO17Q96EF6 278 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 MAELQ96JY0 434 aaKnown RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 OR52B2Q96RD2 323 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 SF3B5Q9BWJ5 86 aaKnown RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 ADAM19Q9H013 955 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 RMND5AQ9H871 391 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 TPT1P8Q9HAU6 139 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 CACYBPQ9HB71 228 aaKnown RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 SDR39U1Q9NRG7 319 aaPredicted RBP5.84□□□□□ -1.47
FN1-220ENST00000480024 NKIRAS1Q9NYS0 192 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 CALML5Q9NZT1 146 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 SEC14L4Q9UDX3 406 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 RAB21Q9UL25 225 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 MOKQ9UQ07 419 aa5.84□□□□□ -1.47
FN1-220ENST00000480024 A0A096LPI6 279 aa5.83□□□□□ -1.48
FN1-220ENST00000480024 IGHV1-18A0A0C4DH31 117 aa5.83□□□□□ -1.48
FN1-220ENST00000480024 RNF212BA8MTL3 300 aa5.83□□□□□ -1.48
FN1-220ENST00000480024 TMEM229AB2RXF0 380 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms