RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	NCF2	P19878	526 aa	Predicted RBP	13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	HTR2A	P28223	471 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	PRKAR1B	P31321	381 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	IRX1	P78414	480 aa	Predicted RBP	13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	EGR4	Q05215	589 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	FAP	Q12884	760 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	GABRA6	Q16445	453 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	GLIPR1L2	Q4G1C9	344 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	TSPO2	Q5TGU0	170 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	C1orf140	Q5VVS0	124 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	BIVM	Q86UB2	503 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	RETREG3	Q86VR2	466 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	P2RY8	Q86VZ1	359 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	COX4I2	Q96KJ9	171 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	MUS81	Q96NY9	551 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF385A	Q96PM9	386 aa	Known RBP	13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	PTDSS2	Q9BVG9	487 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	SF3B5	Q9BWJ5	86 aa	Known RBP	13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	AMBRA1	Q9C0C7	1298 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	TAS2R16	Q9NYV7	291 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	LAMP3	Q9UQV4	416 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	SLC25A15	Q9Y619	301 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	CAD	P27708	2225 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	USF3	Q68DE3	2245 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	NAV3	Q8IVL0	2385 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596		A0A1W2PR80	420 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	C5orf58	C9J3I9	102 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	OVOL3	O00110	214 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	TPST1	O60507	370 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	EDF1	O60869	148 aa	Known RBP	13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	TMCC2	O75069	709 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	FZD7	O75084	574 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	PPIB	P23284	216 aa	Known RBP	13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	SLC25A3	Q00325	362 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	CDK6	Q00534	326 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	PGGHG	Q32M88	737 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	REEP3	Q6NUK4	255 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	DHRS4L2	Q6PKH6	230 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	C6orf89	Q6UWU4	347 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	OR52N5	Q8NH56	324 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	STK35	Q8TDR2	534 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	FBXW5	Q969U6	566 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	MUCL1	Q96DR8	90 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	WFDC6	Q9BQY6	131 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	CXorf56	Q9H5V9	222 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	TMEM38A	Q9H6F2	299 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	ARMC7	Q9H6L4	198 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	CACYBP	Q9HB71	228 aa	Known RBP	13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	ADPRHL2	Q9NX46	363 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	DCTN4	Q9UJW0	460 aa		13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.21	□□□□□ -0.29
CCNL1-222	ENST00000479596	CIB4	A0PJX0	185 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	CCT8L1P	A6NM43	557 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596		H7C1Q1	480 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	ABCD4	O14678	606 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	RPS4X	P62701	263 aa	Known RBP	13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	SPOCK1	Q08629	439 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	SCARB2	Q14108	478 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	SELPLG	Q14242	412 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	RUNDC3A	Q59EK9	446 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	C9orf135	Q5VTT2	229 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	SSX8	Q7RTT4	187 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	GPAT4	Q86UL3	456 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	PTOV1	Q86YD1	416 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	DPP10	Q8N608	796 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	LSMEM1	Q8N8F7	131 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	WDR31	Q8NA23	367 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	SMAP2	Q8WU79	429 aa	Predicted RBP	13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	KTI12	Q96EK9	354 aa	Predicted RBP	13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	PRR14	Q9BWN1	585 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	TAPBPL	Q9BX59	468 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	PIF1	Q9H611	641 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	NPHS2	Q9NP85	383 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	PARPBP	Q9NWS1	579 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	SEC14L4	Q9UDX3	406 aa		13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.2	□□□□□ -0.3
CCNL1-222	ENST00000479596	IGKV1D-42	A0A075B6H8	117 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596		A0A1B0GWA3	101 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	CD8A	P01732	235 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	LGALS3BP	Q08380	585 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	CREB3L2	Q70SY1	520 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596		Q71RC1	249 aa	Predicted RBP	13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	AAED1	Q7RTV5	226 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	DHDDS	Q86SQ9	333 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	EPHX4	Q8IUS5	362 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	MFSD8	Q8NHS3	518 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	RABEP2	Q9H5N1	569 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	C12orf10	Q9HB07	376 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	LEF1	Q9UJU2	399 aa	Predicted RBP	13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	CORO2B	Q9UQ03	480 aa		13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	ANK3	Q12955	4377 aa	Known RBP	13.19	□□□□□ -0.3
CCNL1-222	ENST00000479596	TPST2	O60704	377 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	AHSA1	O95433	338 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	PNMT	P11086	282 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	CD40	P25942	277 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	AQP1	P29972	269 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	CDKN1A	P38936	164 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	RPS5	P46782	204 aa	Known RBP	13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	SELENOP	P49908	381 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms