RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 BCL2L11O43521 198 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 KLHL41O60662 606 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 TGM6O95932 706 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 IL1BP01584 269 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 FCGR3AP08637 254 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 ATP6V1B1P15313 513 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 HNF1AP20823 631 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 PPP2R1BP30154 601 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 ELK3P41970 407 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 NSFP46459 744 aaKnown RBP3.85□□□□□ -1.79
CCDC171-207ENST00000478913 ATP5J2P56134 94 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 GALK2Q01415 458 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 ELOCQ15369 112 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 NHLRC3Q5JS37 347 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 SLC25A30Q5SVS4 291 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 ZSCAN25Q6NSZ9 544 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 RAPH1Q70E73 1250 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 ITPRIPQ8IWB1 547 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 FAM184AQ8NB25 1140 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 OR4F5Q8NH21 305 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 FBXO25Q8TCJ0 367 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 EEF2KMTQ96G04 330 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 PSTPIP2Q9H939 334 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 ELL3Q9HB65 397 aaPredicted RBP3.85□□□□□ -1.79
CCDC171-207ENST00000478913 PALMDQ9NP74 551 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 TUBGCP4Q9UGJ1 667 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 MYH7P12883 1935 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 TRPM6Q9BX84 2022 aa3.85□□□□□ -1.79
CCDC171-207ENST00000478913 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
CCDC171-207ENST00000478913 EEF2KO00418 725 aaKnown RBP3.84□□□□□ -1.79
CCDC171-207ENST00000478913 TSPAN2O60636 221 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 TSPAN12O95859 305 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 PNPP00491 289 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 IGHDP01880 384 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 MELTFP08582 738 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 ALPIP09923 528 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 HSD17B1P14061 328 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 GP9P14770 177 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 AREGP15514 252 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 DRD3P35462 400 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 ACTN3Q08043 901 aaPredicted RBP3.84□□□□□ -1.79
CCDC171-207ENST00000478913 TFDP1Q14186 410 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 UNC50Q53HI1 259 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 RFWD3Q6PCD5 774 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 GKN2Q86XP6 184 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 STK40Q8N2I9 435 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 RELL2Q8NC24 303 aaPredicted RBP3.84□□□□□ -1.79
CCDC171-207ENST00000478913 MUC7Q8TAX7 377 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 RBM18Q96H35 190 aaKnown RBP3.84□□□□□ -1.79
CCDC171-207ENST00000478913 TAS2R16Q9NYV7 291 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 ZNF581Q9P0T4 197 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 SEC14L4Q9UDX3 406 aa3.84□□□□□ -1.79
CCDC171-207ENST00000478913 NAP1L2Q9ULW6 460 aaPredicted RBP3.84□□□□□ -1.79
CCDC171-207ENST00000478913 MRPS2Q9Y399 296 aaKnown RBP3.84□□□□□ -1.79
CCDC171-207ENST00000478913 MUC4Q99102 2169 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 DNAH9Q9NYC9 4486 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 MCF2LO15068 1137 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 RAD51BO15315 384 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 NUDT21O43809 227 aaKnown RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF354AO60765 605 aaPredicted RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 SRSF10O75494 262 aaKnown RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 FCER2P06734 321 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 CCDC159P0C7I6 412 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 FAM200BP0CF97 657 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF18P17022 549 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 OTX2P32243 289 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 SRP14P37108 136 aaKnown RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 ACADSBP45954 432 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 RPL34P49207 117 aaKnown RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 TKTL1P51854 596 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 SMARCB1Q12824 385 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 TSTA3Q13630 321 aaPredicted RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 LASP1Q14847 261 aaKnown RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 EXOSC7Q15024 291 aaKnown RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 TMEM249Q2WGJ8 235 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 C9orf64Q5T6V5 341 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 WDR25Q64LD2 544 aaPredicted RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 CYB5R2Q6BCY4 276 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 STEAP1BQ6NZ63 245 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 ABRAXAS1Q6UWZ7 409 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 RDH11Q8TC12 318 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 RAB39BQ96DA2 213 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 CEP170P1Q96L14 293 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 SENP8Q96LD8 212 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 NACA2Q9H009 215 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 TSPY26PQ9H489 355 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 IL1RL2Q9HB29 575 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 SLC7A10Q9NS82 523 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 PIGVQ9NUD9 493 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 PDP1Q9P0J1 537 aaPredicted RBP3.83□□□□□ -1.8
CCDC171-207ENST00000478913 VPS54Q9P1Q0 977 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 ERVK-18Q9QC07 812 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 KIF3AQ9Y496 699 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 ATP6V1DQ9Y5K8 247 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
CCDC171-207ENST00000478913 DENND4CQ5VZ89 1909 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 A0A087WWV3 80 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 CHEK1O14757 476 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 CYTH3O43739 400 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 SPAG6O75602 509 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms