RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 VSTM4Q8IW00 320 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 LRRC75AQ8NAA5 344 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 OR13G1Q8NGZ3 307 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 OR2G3Q8NGZ4 309 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 OR4A16Q8NH70 328 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 WDR36Q8NI36 951 aaKnown RBP-0.48□□□□□ -2.49
CALD1-218ENST00000478075 KRT35Q92764 455 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 CORO2AQ92828 525 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 RNF145Q96MT1 663 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 WFIKKN1Q96NZ8 548 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 MLPHQ9BV36 600 aaPredicted RBP-0.48□□□□□ -2.49
CALD1-218ENST00000478075 SRMSQ9H3Y6 488 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 WARS2Q9UGM6 360 aaKnown RBP-0.48□□□□□ -2.49
CALD1-218ENST00000478075 MCTS1Q9ULC4 181 aaKnown RBP-0.48□□□□□ -2.49
CALD1-218ENST00000478075 ARID4BQ4LE39 1312 aaPredicted RBP-0.48□□□□□ -2.49
CALD1-218ENST00000478075 ZBED9Q6R2W3 1325 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 SH3TC1Q8TE82 1336 aa-0.48□□□□□ -2.49
CALD1-218ENST00000478075 ROS1P08922 2347 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 HERC2O95714 4834 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 TMEM120BA0PK00 339 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 OR6C70A6NIJ9 312 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 FCN1O00602 326 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 MRPS12O15235 138 aaKnown RBP-0.49□□□□□ -2.49
CALD1-218ENST00000478075 HSPA4LO95757 839 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 HLA-DQA1P01909 254 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 GNAO1P09471 354 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 CBR1P16152 277 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 CNR1P21554 472 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 MAGEA4P43358 317 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 ERFP50548 548 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 REG3AQ06141 175 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 PDIA5Q14554 519 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 TTLL9Q3SXZ7 439 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 TMEM52BQ4KMG9 183 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 AP1ARQ63HQ0 302 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 CYS1Q717R9 158 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 KRT74Q7RTS7 529 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 ZNF567Q8N184 647 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 SFRP1Q8N474 314 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 LY6G5BQ8NDX9 201 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 OR7G3Q8NG95 312 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 OR1N2Q8NGR9 330 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 CFAP36Q96G28 342 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 AURKBQ96GD4 344 aaPredicted RBP-0.49□□□□□ -2.49
CALD1-218ENST00000478075 ELMO2Q96JJ3 720 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 CSPG4P5Q96PW8 444 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 TMEM246Q9BRR3 403 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 ZSCAN5AQ9BUG6 496 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 TBC1D10AQ9BXI6 508 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 TRPV6Q9H1D0 765 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 POLR3FQ9H1D9 316 aaPredicted RBP-0.49□□□□□ -2.49
CALD1-218ENST00000478075 XPO7Q9UIA9 1087 aaKnown RBP-0.49□□□□□ -2.49
CALD1-218ENST00000478075 ADAMTS13Q76LX8 1427 aa-0.49□□□□□ -2.49
CALD1-218ENST00000478075 IGLV10-54A0A075B6I4 117 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 IGKV1D-37A0A075B6S9 117 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 A0A1B0GVI7 797 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 ARHGEF35A5YM69 484 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 OR6C65A6NJZ3 312 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 SYNGR4O95473 234 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 GNA14O95837 355 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 SMIM10L1P0DMW3 83 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 XRCC1P18887 633 aaPredicted RBP-0.5□□□□□ -2.49
CALD1-218ENST00000478075 BDNFP23560 247 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 CCZ1BP86790 482 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 CCZ1P86791 482 aaPredicted RBP-0.5□□□□□ -2.49
CALD1-218ENST00000478075 NME3Q13232 169 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 FAM53BQ14153 422 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 ZSWIM7Q19AV6 140 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 NSUN5P1Q3KNT7 163 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 TIGITQ495A1 244 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 TIGD3Q6B0B8 471 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 SCYL2Q6P3W7 929 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 SLC39A4Q6P5W5 647 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 CBLN3Q6UW01 205 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 C16orf47Q6ZP98 133 aaPredicted RBP-0.5□□□□□ -2.49
CALD1-218ENST00000478075 PAQR9Q6ZVX9 377 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 GET4Q7L5D6 327 aaPredicted RBP-0.5□□□□□ -2.49
CALD1-218ENST00000478075 MIER3Q7Z3K6 550 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 ZNF571Q7Z3V5 609 aaPredicted RBP-0.5□□□□□ -2.49
CALD1-218ENST00000478075 BNIPLQ7Z465 357 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 YRDCQ86U90 279 aaKnown RBP-0.5□□□□□ -2.49
CALD1-218ENST00000478075 GID4Q8IVV7 300 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 CCDC83Q8IWF9 413 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 LRRC43Q8N309 656 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 ARFGAP2Q8N6H7 521 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 ACBD4Q8NC06 268 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 CCDC191Q8NCU4 936 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 OR56B4Q8NH76 319 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 N4BP2L2Q92802 583 aaPredicted RBP-0.5□□□□□ -2.49
CALD1-218ENST00000478075 SLC25A46Q96AG3 418 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 SMIM10Q96HG1 83 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 VPS37BQ9H9H4 285 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 SLCO1B3Q9NPD5 702 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 GLRX2Q9NS18 164 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 TAS2R1Q9NYW7 299 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 ANAPC5Q9UJX4 755 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 TRAF3IP3Q9Y228 551 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 ZMYM6O95789 1325 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 ATP10DQ9P241 1426 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 LRP1Q07954 4544 aaKnown RBP-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms