RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ELP4Q96EB1 424 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 OTUB1Q96FW1 271 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TRMT61AQ96FX7 289 aaKnown RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 SH3YL1Q96HL8 342 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 EGLN2Q96KS0 407 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 AMDHD1Q96NU7 426 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TMEM237Q96Q45 408 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 KCNA7Q96RP8 456 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 LMF2Q9BU23 707 aaKnown RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 FAIM2Q9BWQ8 316 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CACNG6Q9BXT2 260 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 PRRG4Q9BZD6 226 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 STMN4Q9H169 189 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ELOVL6Q9H5J4 265 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ESRP2Q9H6T0 727 aaKnown RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 LRTM1Q9HBL6 345 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 PFDN4Q9NQP4 134 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ZDHHC18Q9NUE0 388 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TMEM160Q9NX00 188 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TAS2R9Q9NYW1 312 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CISD1Q9NZ45 108 aaKnown RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 PSME2Q9UL46 239 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 GTF2A1LQ9UNN4 478 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 OR10H1Q9Y4A9 318 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TIMM22Q9Y584 194 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 NBEAL2Q6ZNJ1 2754 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 DOCK11Q5JSL3 2073 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 DNAH9Q9NYC9 4486 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 NPIPA5A0A0B4J1W7 369 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 IGHV4-61A0A0C4DH41 118 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 A0A1W2PR80 420 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 VWC2LB2RUY7 222 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 NPIPA7E9PJI5 369 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 UBFD1O14562 309 aaKnown RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 ABCD4O14678 606 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 FRS3O43559 492 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 LMX1BO60663 402 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 KCNK2O95069 426 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 NKX2-2O95096 273 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 PGM3O95394 542 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 H6PDO95479 791 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 OTCP00480 354 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 PLGP00747 810 aaPredicted RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 NPIPA8P0DM63 369 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 COX5AP20674 150 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 IGHV1-2P23083 117 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 GCAP28676 217 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 TYK2P29597 1187 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 STX2P32856 288 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 TTKP33981 857 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 KRT20P35900 424 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 OR3A2P47893 321 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 SERPINB8P50452 374 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 NCBP2P52298 156 aaKnown RBP eCLIP4□□□□□ -1.77
CKS1B-207ENST00000477676 NUDT6P53370 316 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 CDH11P55287 796 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 CARD18P57730 90 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF117Q03924 483 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 C2orf54Q08AI8 447 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 C17orf67Q0P5P2 114 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 C2orf80Q0P641 193 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 FOXF1Q12946 379 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 ITGADQ13349 1161 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 NAB1Q13506 487 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 GALEQ14376 348 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 UAP1Q16222 522 aaPredicted RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 DUSP5Q16690 384 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 DECR1Q16698 335 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 NDUFAF6Q330K2 333 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 GLE1Q53GS7 698 aaKnown RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF678Q5SXM1 525 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 FAM120AOSQ5T036 256 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 DDX59Q5T1V6 619 aaKnown RBP eCLIP4□□□□□ -1.77
CKS1B-207ENST00000477676 CCNJQ5T5M9 372 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 ANKRD26P1Q6NSI1 321 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 C11orf87Q6NUJ2 197 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 ANKRD16Q6P6B7 361 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 CBLN3Q6UW01 205 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 Q6ZSR9 355 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 OVCH2Q7RTZ1 564 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 CCDC91Q7Z6B0 441 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 TRABD2AQ86V40 505 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 BANPQ8N9N5 519 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 SPATA4Q8NEY3 305 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 FBXO30Q8TB52 745 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 DCAKDQ8WVC6 231 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 HSD17B8Q92506 261 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 ANP32BQ92688 251 aaKnown RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 CIDECQ96AQ7 238 aaPredicted RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 MSI2Q96DH6 328 aaKnown RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 TRIM44Q96DX7 344 aaPredicted RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 C16orf58Q96GQ5 468 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 KLHL15Q96M94 604 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 HS6ST2Q96MM7 605 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF300Q96RE9 604 aaPredicted RBP4□□□□□ -1.77
CKS1B-207ENST00000477676 BBS4Q96RK4 519 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF382Q96SR6 550 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 PSD2Q9BQI7 771 aa4□□□□□ -1.77
CKS1B-207ENST00000477676 RHNO1Q9BSD3 238 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms