RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	CYLC2	Q14093	348 aa	Predicted RBP	10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	SELPLG	Q14242	412 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	STK11	Q15831	433 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	ELOA3B	Q3SY89	546 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	TIMM23B	Q5SRD1	257 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	NCMAP	Q5T1S8	102 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	CGB2	Q6NT52	195 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	ULK3	Q6PHR2	472 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	C6orf89	Q6UWU4	347 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	ZIC4	Q8N9L1	334 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	ELOA3	Q8NG57	546 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	OR9K2	Q8NGE7	335 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	MFSD8	Q8NHS3	518 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	DNAJA4	Q8WW22	397 aa	Predicted RBP	10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	TMEM45B	Q96B21	275 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	MUCL1	Q96DR8	90 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	CCL19	Q99731	98 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	TMUB1	Q9BVT8	246 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	PRR14	Q9BWN1	585 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	PIF1	Q9H611	641 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	EVA1A	Q9H8M9	152 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	MED4	Q9NPJ6	270 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	SAR1A	Q9NR31	198 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	MALT1	Q9UDY8	824 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	SLC13A4	Q9UKG4	626 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	PRR14L	Q5THK1	2151 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	MED13L	Q71F56	2210 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	ROS1	P08922	2347 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	CIB4	A0PJX0	185 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	OR5H1	A6NKK0	313 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	CCT8L1P	A6NM43	557 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	FTCDNL1	E5RQL4	147 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625		M0QX08	132 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	SMPD2	O60906	423 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	AHSA1	O95433	338 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	RPS5	P46782	204 aa	Known RBP	10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	P2RY4	P51582	365 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	RGS8	P57771	180 aa	Predicted RBP	10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	DMTN	Q08495	405 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	KLF10	Q13118	480 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	PPA1	Q15181	289 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	COQ5	Q5HYK3	327 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	ALG10B	Q5I7T1	473 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	FAM91A1	Q658Y4	838 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	NANOGP8	Q6NSW7	305 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	C5orf46	Q6UWT4	87 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	SEZ6L2	Q6UXD5	910 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	CASP12	Q6UXS9	341 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	NET1	Q7Z628	596 aa	Predicted RBP	10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	GPAT4	Q86UL3	456 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	SLC30A8	Q8IWU4	369 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	SMYD1	Q8NB12	490 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	OR10A6	Q8NH74	314 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	SLC25A36	Q96CQ1	311 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	KTI12	Q96EK9	354 aa	Predicted RBP	10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	MUS81	Q96NY9	551 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	SH3GL1	Q99961	368 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	PTDSS2	Q9BVG9	487 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	NANOG	Q9H9S0	305 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	TMEM27	Q9HBJ8	222 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	SLC7A10	Q9NS82	523 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	TAS2R16	Q9NYV7	291 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	UPB1	Q9UBR1	384 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	TES	Q9UGI8	421 aa	Known RBP	10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	RASD1	Q9Y272	281 aa		10.79	□□□□□ -0.68
PTPN7-210	ENST00000477625	DPRX	A6NFQ7	191 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	PDLIM1	O00151	329 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	HS3ST1	O14792	307 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	OR2T1	O43869	369 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	TPST2	O60704	377 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	RAD51D	O75771	328 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	LGI1	O95970	557 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	NPPA	P01160	153 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	C8B	P07358	591 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	CD3E	P07766	207 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	GZMM	P51124	257 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	NCALD	P61601	193 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	NKX6-1	P78426	367 aa	Predicted RBP	10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	BSPH1	Q075Z2	132 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	MAPRE2	Q15555	327 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	OR1Q1	Q15612	314 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	GABRA6	Q16445	453 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	DUSP7	Q16829	419 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	TRMT5	Q32P41	509 aa	Known RBP	10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	MMEL1	Q495T6	779 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	TSPO2	Q5TGU0	170 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	SHE	Q5VZ18	495 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	OR7E24	Q6IFN5	339 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	ADAM5	Q6NVV9	412 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	CREB3L2	Q70SY1	520 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	AAED1	Q7RTV5	226 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	PATL1	Q86TB9	770 aa	Known RBP	10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	LRRC75A-AS1	Q8N1F1	130 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	ZNF611	Q8N823	705 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	SLC38A4	Q969I6	547 aa		10.78	□□□□□ -0.68
PTPN7-210	ENST00000477625	TAAR8	Q969N4	342 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms