RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 LAS2Q8IYD9 372 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 GPR135Q8IZ08 494 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF614Q8N883 585 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 SIDT2Q8NBJ9 832 aaKnown RBP11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 OR56B1Q8NGI3 324 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 LMF1Q96S06 567 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 S100A13Q99584 98 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 CPPED1Q9BRF8 314 aaPredicted RBP11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 UTP23Q9BRU9 249 aaKnown RBP11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 ACTL8Q9H568 366 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 IL26Q9NPH9 171 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 TAS2R5Q9NYW4 299 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 SPIN1Q9Y657 262 aaPredicted RBP11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 TRBV5-4A0A0C4DH59 114 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 TP53I11O14683 189 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SNRPCP09234 159 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 PSMB1P20618 241 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 FGF7P21781 194 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 PTPN6P29350 595 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SHC1P29353 583 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 MECP2P51608 486 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 WNT3P56703 355 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SORDQ00796 357 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SCGB2B2Q4G0G5 96 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 C1orf185Q5T7R7 199 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF385CQ66K41 422 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 ABLIM2Q6H8Q1 611 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 RAB12Q6IQ22 244 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 GDPD4Q6W3E5 623 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 CBLL1Q75N03 491 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 DPPA4Q7L190 304 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SZRD1Q7Z422 152 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 C6orf120Q7Z4R8 191 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SPRED2Q7Z698 418 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF619Q8N2I2 560 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 C19orf47Q8N9M1 422 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 OR11G2Q8NGC1 345 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 OR10G2Q8NGC3 310 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 OR5M1Q8NGP8 315 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 CD200R1Q8TD46 325 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 TMEM203Q969S6 136 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 LINGO1Q96FE5 620 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 NRIP2Q9BQI9 281 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 FAM83CQ9BQN1 747 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 WRAP53Q9BUR4 548 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 KRCC1Q9NPI7 259 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 MMP26Q9NRE1 261 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 ASF1BQ9NVP2 202 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 FBXL4Q9UKA2 621 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SNX11Q9Y5W9 270 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 KANTRA0A1W2PQU2 76 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SMIM30A4D0T7 59 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 NPIPB15A6NHN6 443 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 ZAR1LA6NP61 321 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 GABRR3A8MPY1 467 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 CYTIPO60759 359 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC25A12O75746 678 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 YIF1AO95070 293 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 NFATC1O95644 943 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 ACTL6AO96019 429 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 PMP2P02689 132 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 HKR1P10072 659 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 MTHFD2P13995 350 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 GALP22466 123 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 ACRV1P26436 265 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 WNT5AP41221 380 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 AKR1C2P52895 323 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 AP3S2P59780 193 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 RPS25P62851 125 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 EIF5AP63241 154 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 HGFACQ04756 655 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 AKR1C1Q04828 323 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 CNTN1Q12860 1018 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 HAGHQ16775 308 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 FAM219BQ5XKK7 198 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 FBXW9Q5XUX1 488 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 MTFR2Q6P444 385 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 Q6ZVU0 165 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 GPSM1Q86YR5 675 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 FBXO15Q8NCQ5 510 aaPredicted RBP11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 OR2L3Q8NG85 312 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 MYLIPQ8WY64 445 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 GAL3ST4Q96RP7 486 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 MRI1Q9BV20 369 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 TREM1Q9NP99 234 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 LHX6Q9UPM6 363 aa11.69□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF106Q9H2Y7 1883 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 DUXAA6NLW8 204 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SYT5O00445 386 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 GAPDHSO14556 408 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 ECI2O75521 394 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SRPRAP08240 638 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 NR2F6P10588 404 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 ADH5P11766 374 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 RPL3P39023 403 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 DGKGP49619 791 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 F2RL1P55085 397 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 WNT4P56705 351 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms