RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 FBXO45P0C2W1 286 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 GIFP27352 417 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 SNRPD2P62316 118 aaKnown RBP13.5□□□□□ -0.25
HDAC6-220ENST00000477528 OR7A5Q15622 319 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 ZIC1Q15915 447 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 GDPD3Q7L5L3 318 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 VASH1Q7L8A9 365 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-220ENST00000477528 TMEM99Q8N816 258 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 ELP5Q8TE02 316 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 LMF1Q96S06 567 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 PLA2G12AQ9BZM1 189 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 SYNPO2LQ9H987 977 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 UBQLN2Q9UHD9 624 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 MGAT4AQ9UM21 535 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 H3BML4 177 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 BCAT2O15382 392 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-220ENST00000477528 CD1CP29017 333 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 PCGF3Q3KNV8 242 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 ZMAT1Q5H9K5 638 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 SIX5Q8N196 739 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 LRFN5Q96NI6 719 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 LRRC3BQ96PB8 259 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 OR1F2PQ96R84 312 aa13.5□□□□□ -0.25
HDAC6-220ENST00000477528 CCNL2Q96S94 520 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-220ENST00000477528 NAA11Q9BSU3 229 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-220ENST00000477528 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 ACOD1A6NK06 481 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 UBL3O95164 117 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 CHRNB1P11230 501 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 FBXO42Q6P3S6 717 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 DNAJC5GQ8N7S2 189 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 DUSP23Q9BVJ7 150 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 DHCR7Q9UBM7 475 aaKnown RBP13.49□□□□□ -0.25
HDAC6-220ENST00000477528 ATXN7L1Q9ULK2 861 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-220ENST00000477528 HOXC4P09017 264 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-220ENST00000477528 ZNF43P17038 809 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 CBX5P45973 191 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 CTBP2P56545 445 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 SWI5Q1ZZU3 235 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 RAET1LQ5VY80 246 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 CD300LDQ6UXZ3 194 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 OR2L13Q8N349 312 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 BBS1Q8NFJ9 593 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 ZNF587Q96SQ5 575 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-220ENST00000477528 URM1Q9BTM9 101 aaKnown RBP13.49□□□□□ -0.25
HDAC6-220ENST00000477528 PPIL3Q9H2H8 161 aaKnown RBP13.49□□□□□ -0.25
HDAC6-220ENST00000477528 KCND3Q9UK17 655 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 TRAV36DV7A0A075B6V5 113 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 RAD1O60671 282 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 CSF1P09603 554 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 POLR2HP52434 150 aaKnown RBP13.49□□□□□ -0.25
HDAC6-220ENST00000477528 EMP3P54852 163 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 EIF5AP63241 154 aaKnown RBP13.49□□□□□ -0.25
HDAC6-220ENST00000477528 CDK5Q00535 292 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 ASAH1Q13510 395 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 C5orf46Q6UWT4 87 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 BTN2A1Q7KYR7 527 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 DGLUCYQ7Z3D6 616 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 OR2T35Q8NGX2 323 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 PGAM5Q96HS1 289 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 OR2A14Q96R47 310 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 ELOVL3Q9HB03 270 aa13.49□□□□□ -0.25
HDAC6-220ENST00000477528 RP2O75695 350 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 RLN2P04090 185 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 CD53P19397 219 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 HTR2BP41595 481 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 HYAL1Q12794 435 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 C14orf28Q4W4Y0 310 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 FCRLAQ7L513 359 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 MED18Q9BUE0 208 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 RPP25Q9BUL9 199 aaKnown RBP13.48□□□□□ -0.25
HDAC6-220ENST00000477528 ZNF350Q9GZX5 532 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 RANGRFQ9HD47 186 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-220ENST00000477528 RDH8Q9NYR8 311 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 ALG5Q9Y673 324 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 KDM4EB2RXH2 506 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-220ENST00000477528 ZNF749O43361 778 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 SYT7O43581 403 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 LILRB5O75023 590 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 GLCEO94923 617 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 FABP5Q01469 135 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 CDNFQ49AH0 187 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 OR2M2Q96R28 347 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 CD93Q9NPY3 652 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 IL20Q9NYY1 176 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 ZC3H12DA2A288 527 aaKnown RBP13.48□□□□□ -0.25
HDAC6-220ENST00000477528 SLC43A1O75387 559 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 SOD1P00441 154 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 HOXD12P35452 270 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 NR0B2Q15466 257 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 Q499Y3 187 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 NKAIN2Q5VXU1 208 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 MTFR2Q6P444 385 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 OR14A2Q96R54 314 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 HHLA2Q9UM44 414 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 ANKRD33BA6NCL7 494 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 SUSD5O60279 629 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 DNAJB6O75190 326 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 MT-ND4P03905 459 aa13.48□□□□□ -0.25
HDAC6-220ENST00000477528 ABCA11PQ4W5N1 156 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms