RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PLPP5Q8NEB5 264 aa10.48□□□□□ -0.73
NUP188-205ENST00000477069 DAZLQ92904 295 aaKnown RBP10.48□□□□□ -0.73
NUP188-205ENST00000477069 GAL3ST4Q96RP7 486 aa10.48□□□□□ -0.73
NUP188-205ENST00000477069 CDX2Q99626 313 aaPredicted RBP10.48□□□□□ -0.73
NUP188-205ENST00000477069 TGIF2Q9GZN2 237 aa10.48□□□□□ -0.73
NUP188-205ENST00000477069 CTSFQ9UBX1 484 aa10.48□□□□□ -0.73
NUP188-205ENST00000477069 U3KQA8 63 aa10.48□□□□□ -0.73
NUP188-205ENST00000477069 HLA-DQB1P01920 261 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 APEHP13798 732 aaKnown RBP10.47□□□□□ -0.73
NUP188-205ENST00000477069 PNLIPP16233 465 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 THBS2P35442 1172 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 RPL4P36578 427 aaKnown RBP10.47□□□□□ -0.73
NUP188-205ENST00000477069 SLC6A8P48029 635 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 SQSTM1Q13501 440 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 ASAH1Q13510 395 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 IL10RAQ13651 578 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 LCN1P1Q5VSP4 162 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 SPATC1Q76KD6 591 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 NRARPQ7Z6K4 114 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 SLC35F2Q8IXU6 374 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 ABHD4Q8TB40 342 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 KLHL1Q9NR64 748 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 COMMD3Q9UBI1 195 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 SIT1Q9Y3P8 196 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 GRIP1Q9Y3R0 1128 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 IGLV3-12A0A075B6K2 115 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 A0A0G2JK05 382 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 CDC14CA4D256 554 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 OR6C76A6NM76 312 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 C4orf47A7E2U8 309 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 ALG1L2C9J202 215 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 TXNDC12O95881 172 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 AQP2P41181 271 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 CCR4P51679 360 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 NRG3P56975 720 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 CNIH2Q6PI25 160 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 METAP1DQ6UB28 335 aaPredicted RBP10.47□□□□□ -0.73
NUP188-205ENST00000477069 TEX19Q8NA77 164 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 OR51L1Q8NGJ5 315 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 RPS4Y2Q8TD47 263 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 KTI12Q96EK9 354 aaPredicted RBP10.47□□□□□ -0.73
NUP188-205ENST00000477069 PELI1Q96FA3 418 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 DPYSL5Q9BPU6 564 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 COPS3Q9UNS2 423 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 SLC6A5Q9Y345 797 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 ARID1BQ8NFD5 2236 aaPredicted RBP10.47□□□□□ -0.73
NUP188-205ENST00000477069 ASXL3Q9C0F0 2248 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 TEX13CA0A0J9YWL9 993 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 C17orf51A8MQB3 221 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 CD1AP06126 327 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 ANKRD34CP0C6C1 535 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 PTBP1P26599 531 aaKnown RBP eCLIP10.47□□□□□ -0.73
NUP188-205ENST00000477069 ABCD3P28288 659 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 EPHA8P29322 1005 aaPredicted RBP10.47□□□□□ -0.73
NUP188-205ENST00000477069 SHC1P29353 583 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 TACR3P29371 465 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 CDKN2AP42771 156 aaKnown RBP10.47□□□□□ -0.73
NUP188-205ENST00000477069 EVX1P49640 407 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 NR0B1P51843 470 aaKnown RBP10.47□□□□□ -0.73
NUP188-205ENST00000477069 SLC25A1P53007 311 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 ACTA2P62736 377 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 ACTG2P63267 376 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 FAM27D1Q5T7N8 215 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 RHBDD2Q6NTF9 364 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 TMEM71Q6P5X7 295 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 LANCL3Q6ZV70 420 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 HPS1Q92902 700 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 OMA1Q96E52 524 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 NEDD4LQ96PU5 975 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 SACM1LQ9NTJ5 587 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 MKL2Q9ULH7 1088 aa10.47□□□□□ -0.73
NUP188-205ENST00000477069 SNPHO15079 494 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 SELENOFO60613 162 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 WISP1O95388 367 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 APOA1P02647 267 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 CD14P08571 375 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 IL12BP29460 328 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 NAA10P41227 235 aaPredicted RBP10.46□□□□□ -0.73
NUP188-205ENST00000477069 GRK6P43250 576 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 ARRB1P49407 418 aaPredicted RBP10.46□□□□□ -0.73
NUP188-205ENST00000477069 PNLIPRP2P54317 469 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 SLC3A1Q07837 685 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 SELENBP1Q13228 472 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 CDK5R1Q15078 307 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 PON3Q15166 354 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 TP53I3Q53FA7 332 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 HBMQ6B0K9 141 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 MAMSTRQ6ZN01 415 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 ACOT12Q8WYK0 555 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
NUP188-205ENST00000477069 SMIM19Q96E16 107 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 Q96M85 177 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 UBL7Q96S82 380 aaPredicted RBP10.46□□□□□ -0.73
NUP188-205ENST00000477069 LPAR4Q99677 370 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 SYNDIG1Q9H7V2 258 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 NANSQ9NR45 359 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 RP1P56715 2156 aa10.46□□□□□ -0.73
NUP188-205ENST00000477069 MAGEB4O15481 346 aaPredicted RBP10.46□□□□□ -0.74
NUP188-205ENST00000477069 FADS1O60427 444 aa10.46□□□□□ -0.74
NUP188-205ENST00000477069 EIF4E2O60573 245 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms