RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TMEM151AQ8N4L1 468 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 TMEM99Q8N816 258 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 ZFP28Q8NHY6 868 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 SERHL2Q9H4I8 314 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 MMP26Q9NRE1 261 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 SNX12Q9UMY4 172 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 SPIN1Q9Y657 262 aaPredicted RBP13.07□□□□□ -0.32
SMG5-204ENST00000476954 CACNG2Q9Y698 323 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 MDFIC2A0A1B0GVS7 189 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 ZC3H12DA2A288 527 aaKnown RBP13.06□□□□□ -0.32
SMG5-204ENST00000476954 TMEM229AB2RXF0 380 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 TRIM49D1C9J1S8 452 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 EIF3HO15372 352 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMG5-204ENST00000476954 BCKDHAP12694 445 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 GATA3P23771 443 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 RYKP34925 604 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 FRKP42685 505 aaPredicted RBP13.06□□□□□ -0.32
SMG5-204ENST00000476954 RAG2P55895 527 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 SLC35A1P78382 337 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 ARF1P84077 181 aaKnown RBP13.06□□□□□ -0.32
SMG5-204ENST00000476954 NAB1Q13506 487 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 OLFML2AQ68BL7 652 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 ABHD12BQ7Z5M8 362 aaPredicted RBP13.06□□□□□ -0.32
SMG5-204ENST00000476954 MDP1Q86V88 176 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 MAGEE2Q8TD90 523 aaPredicted RBP13.06□□□□□ -0.32
SMG5-204ENST00000476954 POP5Q969H6 163 aaKnown RBP13.06□□□□□ -0.32
SMG5-204ENST00000476954 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 TMEM237Q96Q45 408 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 NAA11Q9BSU3 229 aaPredicted RBP13.06□□□□□ -0.32
SMG5-204ENST00000476954 BEX1Q9HBH7 125 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 GRHL1Q9NZI5 618 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 SH3BP4Q9P0V3 963 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 TRAPPC4Q9Y296 219 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 PPP2R2CQ9Y2T4 447 aa13.06□□□□□ -0.32
SMG5-204ENST00000476954 IGHV3OR16-10A0A075B7F0 116 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 NPIPB8E9PQR5 432 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 PLXNB1O43157 2135 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 RSL1D1O76021 490 aaKnown RBP13.05□□□□□ -0.32
SMG5-204ENST00000476954 AKR7A3O95154 331 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 CSTAP01040 98 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 PAX7P23759 505 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 STX2P32856 288 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 GPR68Q15743 365 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 VAX1Q5SQQ9 334 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 ZNF678Q5SXM1 525 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 REP15Q6BDI9 236 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 CLHC1Q8NHS4 586 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 KIF18AQ8NI77 898 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 ZNF563Q8TA94 476 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 ADAMTS15Q8TE58 950 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 PPCDCQ96CD2 204 aa13.05□□□□□ -0.32
SMG5-204ENST00000476954 TESQ9UGI8 421 aaKnown RBP13.05□□□□□ -0.32
SMG5-204ENST00000476954 LEF1Q9UJU2 399 aaPredicted RBP13.05□□□□□ -0.32
SMG5-204ENST00000476954 COL7A1Q02388 2944 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 TMEM72A0PK05 275 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 FCMRO60667 390 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 EIF1BO60739 113 aaKnown RBP13.04□□□□□ -0.32
SMG5-204ENST00000476954 KRT34O76011 436 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 SEC14L2O76054 403 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 RAD52P43351 418 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 MAGEA12P43365 314 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 CLK1P49759 484 aaKnown RBP13.04□□□□□ -0.32
SMG5-204ENST00000476954 ATP4BP51164 291 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 CCL8P80075 99 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 IMPG1Q17R60 797 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 TEX35Q5T0J7 233 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 PAQR6Q6TCH4 344 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 GRINAQ7Z429 371 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 GPAT4Q86UL3 456 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
SMG5-204ENST00000476954 BHLHE22Q8NFJ8 381 aaPredicted RBP13.04□□□□□ -0.32
SMG5-204ENST00000476954 KTI12Q96EK9 354 aaPredicted RBP13.04□□□□□ -0.32
SMG5-204ENST00000476954 SDF2Q99470 211 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 MRPL57Q9BQC6 102 aaKnown RBP13.04□□□□□ -0.32
SMG5-204ENST00000476954 ACTRT3Q9BYD9 372 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 MRPL46Q9H2W6 279 aaKnown RBP13.04□□□□□ -0.32
SMG5-204ENST00000476954 TNFRSF19Q9NS68 423 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 DUSP13Q9UII6 198 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 NOTCH3Q9UM47 2321 aa13.04□□□□□ -0.32
SMG5-204ENST00000476954 A0A1B0GUS0 222 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 SERTM1A2A2V5 107 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 ANKRD28O15084 1053 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 URI1O94763 535 aaPredicted RBP13.03□□□□□ -0.32
SMG5-204ENST00000476954 SELEP16581 610 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 ARR3P36575 388 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 MAGEA4P43358 317 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 ROR2Q01974 943 aaKnown RBP13.03□□□□□ -0.32
SMG5-204ENST00000476954 HNRNPA0Q13151 305 aaKnown RBP13.03□□□□□ -0.32
SMG5-204ENST00000476954 TP53BP2Q13625 1128 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 FAM189A2Q15884 450 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 ZNF141Q15928 474 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 MAPK14Q16539 360 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 TAF9Q16594 264 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 NIPAL3Q6P499 406 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 HMGN2P46Q86SG4 172 aa13.03□□□□□ -0.32
SMG5-204ENST00000476954 RETREG3Q86VR2 466 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 783.1 ms