RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SPICQ8N5J4 248 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 ZNF655Q8N720 491 aaPredicted RBP6.3□□□□□ -1.4
UBR4-212ENST00000475973 SLC16A11Q8NCK7 471 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 C17orf47Q8NEP4 570 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 OR7G2Q8NG99 324 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 OR8K5Q8NH50 307 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 OR51Q1Q8NH59 317 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 OR56B4Q8NH76 319 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 UBASH3BQ8TF42 649 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 TMEM239Q8WW34 195 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 LIPHQ8WWY8 451 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 RSC1A1Q92681 617 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 KLK6Q92876 244 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 RHOVQ96L33 236 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 ELF4Q99607 663 aaPredicted RBP6.3□□□□□ -1.4
UBR4-212ENST00000475973 MRI1Q9BV20 369 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 TMED9Q9BVK6 235 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 BEX2Q9BXY8 128 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 QRSL1Q9H0R6 528 aaKnown RBP6.3□□□□□ -1.4
UBR4-212ENST00000475973 OR51J1Q9H342 316 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 DPAGT1Q9H3H5 408 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 C12orf10Q9HB07 376 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 DLL4Q9NR61 685 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 STMN3Q9NZ72 180 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 PIPOXQ9P0Z9 390 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 TRPC4Q9UBN4 977 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 CHRNA9Q9UGM1 479 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 PILRAQ9UKJ1 303 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 NUP50Q9UKX7 468 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 ZFR2Q9UPR6 939 aaKnown RBP6.3□□□□□ -1.4
UBR4-212ENST00000475973 RASD1Q9Y272 281 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 NTNG1Q9Y2I2 539 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 CSNK1G3Q9Y6M4 447 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 HEATR5BQ9P2D3 2071 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 CKAP5Q14008 2032 aa6.3□□□□□ -1.4
UBR4-212ENST00000475973 TBC1D3DA0A087WVF3 549 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 TBC1D3IA0A087WXS9 549 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 A0A0B4J2E0 115 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 LINC00854A0A1B0GVQ3 168 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 A0A1B0GX12 115 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 OR2M5A3KFT3 312 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 A6NCN8 305 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 NAP1L6A6NFF2 107 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 SLC9B1P1A6NJY1 282 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 TBC1D3LB9A6J9 549 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 NPIPB9F8W1W9 429 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 H0Y8X5 98 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ARPC3O15145 178 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ERI3O43414 337 aaKnown RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 FRS3O43559 492 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 PLRG1O43660 514 aaKnown RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 GPRIN2O60269 458 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 PIP5K1CO60331 668 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 LDB3O75112 727 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 PRKRAO75569 313 aaKnown RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 NKX2-2O95096 273 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 PCDH8O95206 1070 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 MPC2O95563 127 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ATP1B1P05026 303 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 IL5P05113 134 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 MELTFP08582 738 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 CHRM5P08912 532 aaPredicted RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 ANKRD34CP0C6C1 535 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 SLC35G4P0C7Q5 338 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 TBC1D3HP0C7X1 549 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 RRASP10301 218 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ANXA3P12429 323 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ATF1P18846 271 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 CXCL3P19876 107 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 STOMP27105 288 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ACAA2P42765 397 aaKnown RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 SCAND1P57086 179 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 RGS8P57771 180 aaPredicted RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 STXBP1P61764 594 aaKnown RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 SNRPNP63162 240 aaKnown RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 PITPNAQ00169 270 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 TNFRSF17Q02223 184 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ILF3Q12906 894 aaKnown RBP eCLIP6.29□□□□□ -1.4
UBR4-212ENST00000475973 CDK5R1Q15078 307 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 OR1Q1Q15612 314 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 DUSP5Q16690 384 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 SLC25A35Q3KQZ1 300 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ACSM3Q53FZ2 586 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 SMUG1Q53HV7 270 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 NHLRC3Q5JS37 347 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 FAM69AQ5T7M9 428 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 TBC1D3CQ6IPX1 549 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 FBXO42Q6P3S6 717 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 PLBD1Q6P4A8 553 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 FAM199XQ6PEV8 388 aaPredicted RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 PLEKHM3Q6ZWE6 761 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 GPAT4Q86UL3 456 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 AMIGO1Q86WK6 493 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 TBC1D3Q8IZP1 549 aaPredicted RBP6.29□□□□□ -1.4
UBR4-212ENST00000475973 ZNF619Q8N2I2 560 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ARHGEF39Q8N4T4 335 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 EXD3Q8N9H8 876 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 SPERTQ8NA61 448 aa6.29□□□□□ -1.4
UBR4-212ENST00000475973 ZNF527Q8NB42 609 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms