RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 RPL3P39023 403 aaKnown RBP13.09□□□□□ -0.31
NME1-206ENST00000475573 SH3BGRP55822 239 aaPredicted RBP13.09□□□□□ -0.31
NME1-206ENST00000475573 MRPS11P82912 194 aaKnown RBP13.09□□□□□ -0.31
NME1-206ENST00000475573 SNTB2Q13425 540 aaKnown RBP13.09□□□□□ -0.31
NME1-206ENST00000475573 DAG1Q14118 895 aa13.09□□□□□ -0.31
NME1-206ENST00000475573 OTUD3Q5T2D3 398 aaPredicted RBP13.09□□□□□ -0.31
NME1-206ENST00000475573 TIFABQ6ZNK6 161 aa13.09□□□□□ -0.31
NME1-206ENST00000475573 NELFAQ9H3P2 528 aa13.09□□□□□ -0.31
NME1-206ENST00000475573 MS4A5Q9H3V2 200 aa13.09□□□□□ -0.31
NME1-206ENST00000475573 ZNF275Q9NSD4 429 aaPredicted RBP13.09□□□□□ -0.31
NME1-206ENST00000475573 MED29Q9NX70 200 aa13.09□□□□□ -0.31
NME1-206ENST00000475573 REV1Q9UBZ9 1251 aa13.09□□□□□ -0.31
NME1-206ENST00000475573 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
NME1-206ENST00000475573 PPIAL4AQ9Y536 164 aa13.09□□□□□ -0.31
NME1-206ENST00000475573 WNK1Q9H4A3 2382 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 A0A096LPE4 126 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 TMED7-TICAM2A0A0A6YYA0 188 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 A0A1W2PPZ6 126 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 DUXAA6NLW8 204 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 PPIHO43447 177 aaKnown RBP13.08□□□□□ -0.32
NME1-206ENST00000475573 FCMRO60667 390 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 BCAS1O75363 584 aaPredicted RBP13.08□□□□□ -0.32
NME1-206ENST00000475573 HPXP02790 462 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 CBR1P16152 277 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 CCNA2P20248 432 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 COL8A2P25067 703 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 FPR2P25090 351 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 LSM12Q3MHD2 195 aaKnown RBP13.08□□□□□ -0.32
NME1-206ENST00000475573 RFTN2Q52LD8 501 aaPredicted RBP13.08□□□□□ -0.32
NME1-206ENST00000475573 ZNF311Q5JNZ3 666 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 HIST2H2BDQ6DRA6 164 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 RIBC1Q8N443 379 aaPredicted RBP13.08□□□□□ -0.32
NME1-206ENST00000475573 IL17RDQ8NFM7 739 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 OR7A2PQ8NGA2 310 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 OR2T11Q8NH01 316 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 ZNF416Q9BWM5 594 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 ZMAT3Q9HA38 289 aaKnown RBP13.08□□□□□ -0.32
NME1-206ENST00000475573 NOX3Q9HBY0 568 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
NME1-206ENST00000475573 TMED7Q9Y3B3 224 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 CORINQ9Y5Q5 1042 aa13.08□□□□□ -0.32
NME1-206ENST00000475573 TMEM72A0PK05 275 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 AQP7P3A6NL99 342 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 POM121CA8CG34 1229 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 LSM1O15116 133 aaKnown RBP13.07□□□□□ -0.32
NME1-206ENST00000475573 PRSS23O95084 383 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 MPZL1O95297 269 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 C6orf47O95873 294 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 GSNP06396 782 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 LAMP1P11279 417 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 BCKDHAP12694 445 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 ADRA2CP18825 462 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 ARR3P36575 388 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 SELENOPP49908 381 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 POLR2HP52434 150 aaKnown RBP13.07□□□□□ -0.32
NME1-206ENST00000475573 MAP2K6P52564 334 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 RPS26P62854 115 aaKnown RBP13.07□□□□□ -0.32
NME1-206ENST00000475573 IL13RA1P78552 427 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 MAPK14Q16539 360 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 ARHGAP11BQ3KRB8 267 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 FAM153CQ494X1 144 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 ATP6AP1LQ52LC2 224 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 LIPMQ5VYY2 423 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 AP1ARQ63HQ0 302 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 CLEC6AQ6EIG7 209 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 KRT80Q6KB66 452 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 RNF165Q6ZSG1 346 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 LINGO2Q7L985 606 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 GPAT4Q86UL3 456 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 NATD1Q8N6N6 113 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 OR5AK3PQ8NH89 298 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 YIPF5Q969M3 257 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 MRPL37Q9BZE1 423 aaKnown RBP13.07□□□□□ -0.32
NME1-206ENST00000475573 SLITRK2Q9H156 845 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 SERHL2Q9H4I8 314 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 ZNF665Q9H7R5 613 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 ATAD3AQ9NVI7 634 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 OXSMQ9NWU1 459 aa13.07□□□□□ -0.32
NME1-206ENST00000475573 AKR7A3O95154 331 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 GPIP06744 558 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 MYL2P10916 166 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 MATN1P21941 496 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 PRTN3P24158 256 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 ZFP36P26651 326 aaKnown RBP13.06□□□□□ -0.32
NME1-206ENST00000475573 IDH2P48735 452 aaKnown RBP13.06□□□□□ -0.32
NME1-206ENST00000475573 ZP4Q12836 540 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 NPRL3Q12980 569 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 CFAP157Q5JU67 520 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 DCAF12L2Q5VW00 463 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 ZYG11AQ6WRX3 759 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 RBMS3Q6XE24 437 aaKnown RBP13.06□□□□□ -0.32
NME1-206ENST00000475573 OLIG3Q7RTU3 272 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 C16orf62Q7Z3J2 963 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 ARFGAP2Q8N6H7 521 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 TMEM99Q8N816 258 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 RNF217Q8TC41 542 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 RAB39BQ96DA2 213 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 LINC00470Q9BZP3 86 aa13.06□□□□□ -0.32
NME1-206ENST00000475573 OSGIN1Q9UJX0 560 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms