RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PLPPR4Q7Z2D5 763 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 ANKRD33Q7Z3H0 272 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 GGNQ86UU5 652 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 CCDC117Q8IWD4 279 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 YAF2Q8IY57 180 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 TBC1D3Q8IZP1 549 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 MMP21Q8N119 569 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 RNF148Q8N7C7 305 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 DBF4BQ8NFT6 615 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 OR5B17Q8NGF7 314 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 OR9Q1Q8NGQ5 310 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 OR52J3Q8NH60 311 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 SCAMP5Q8TAC9 235 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 NUBPLQ8TB37 319 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 CD99L2Q8TCZ2 262 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 CD200R1Q8TD46 325 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 GPR151Q8TDV0 419 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 DUSP19Q8WTR2 217 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 TMEM234Q8WY98 164 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 HIST1H2BAQ96A08 127 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 SPSB4Q96A44 273 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 CPNE2Q96FN4 548 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 SLC41A3Q96GZ6 507 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 CDKN2AIPNLQ96HQ2 116 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 C20orf173Q96LM9 149 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 TMEM56Q96MV1 263 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 PARK7Q99497 189 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 HOPXQ9BPY8 73 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 THAP7Q9BT49 309 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 TMEM43Q9BTV4 400 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 PKIBQ9C010 78 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 C20orf27Q9GZN8 174 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 OR2AG1Q9H205 316 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 OR51J1Q9H342 316 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 DNAJC4Q9NNZ3 241 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 ACP6Q9NPH0 428 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 HEYLQ9NQ87 328 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 BARHL2Q9NY43 387 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 SLCO1C1Q9NYB5 712 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 KLHL8Q9P2G9 620 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 NLKQ9UBE8 527 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 MGAT4CQ9UBM8 478 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 DNAJB11Q9UBS4 358 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 NDRG4Q9ULP0 352 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 ABT1Q9ULW3 272 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 ORC6Q9Y5N6 252 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 OR51B4Q9Y5P0 310 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 MRPS18BQ9Y676 258 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 TMEM56-RWDD3S4R434 201 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 SCN11AQ9UI33 1791 aa5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 MYH9P35579 1960 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-215ENST00000475319 ATRNL1Q5VV63 1379 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 LOC100130705A0A1B0GUX0 176 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 TCRBV7S2A1N4TA0A589 114 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 CPED1A4D0V7 1026 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 PI4KAP2A4QPH2 592 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 PRORSD1PA6NEY8 169 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 HMSDA8MTL9 139 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 RAB27BO00194 218 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 DVL1O14640 695 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 CA11O75493 328 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 ERAL1O75616 437 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 SERPINA1P01009 418 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 KNG1P01042 644 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 MT-ND1P03886 318 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 GRPP07492 148 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 HKR1P10072 659 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 CTSAP10619 480 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 SLC2A2P11168 524 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 GTF2F2P13984 249 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 GYPEP15421 78 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 UGT2B7P16662 529 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 NPPBP16860 134 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 SERPINA2P20848 420 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 TUBG1P23258 451 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 HTR2CP28335 458 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 SLC6A4P31645 630 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 GKP32189 559 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 THPOP40225 353 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 EFNA3P52797 238 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 DLX5P56178 289 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 ATP5IP56385 69 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 RAB8AP61006 207 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 DUSP2Q05923 314 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 FOXM1Q08050 763 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 ZNF616Q08AN1 781 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 ENPP2Q13822 863 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 TSTQ16762 297 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 RNF151Q2KHN1 245 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 CTU2Q2VPK5 515 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 MESTQ5EB52 335 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 FAM182AQ5T1J6 154 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 MARC1Q5VT66 337 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 C9orf135Q5VTT2 229 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 H3F3CQ6NXT2 135 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 AADACL2Q6P093 401 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 C8orf82Q6P1X6 216 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 CES3Q6UWW8 571 aa5.5□□□□□ -1.53
ECHDC1-215ENST00000475319 GSG1LQ6UXU4 331 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms