RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 VMACQ2NL98 169 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 C6orf89Q6UWU4 347 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 PATL1Q86TB9 770 aaKnown RBP21.25■□□□□ 0.99
CPNE1-223ENST00000475146 SLC26A7Q8TE54 656 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 SLC25A36Q96CQ1 311 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 HS3ST6Q96QI5 342 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 EVA1AQ9H8M9 152 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 C12orf10Q9HB07 376 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 GID8Q9NWU2 228 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 M0R3H8 397 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 PNMTP11086 282 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 IGHV1-2P23083 117 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 RPS5P46782 204 aaKnown RBP21.24■□□□□ 0.99
CPNE1-223ENST00000475146 GZMMP51124 257 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 TESK1Q15569 626 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 FBXW9Q5XUX1 488 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 ULK3Q6PHR2 472 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 GPAT4Q86UL3 456 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 POU5F2Q8N7G0 328 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 OR9K2Q8NGE7 335 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 WFDC6Q9BQY6 131 aa21.24■□□□□ 0.99
CPNE1-223ENST00000475146 KLF4O43474 513 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 CCDC22O60826 627 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 ATE1O95260 518 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 COX5AP20674 150 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 NTF4P34130 210 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 EGR4Q05215 589 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 OR1Q1Q15612 314 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 TAB1Q15750 504 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 STK11Q15831 433 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 DUSP7Q16829 419 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 TMEM225Q6GV28 225 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 GPR32P1Q8NGA4 272 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 MFSD8Q8NHS3 518 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 RCN3Q96D15 328 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 KTI12Q96EK9 354 aaPredicted RBP21.23■□□□□ 0.99
CPNE1-223ENST00000475146 SLC47A1Q96FL8 570 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 PLPPR2Q96GM1 343 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 ARHGDIGQ99819 225 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 USB1Q9BQ65 265 aaKnown RBP21.23■□□□□ 0.99
CPNE1-223ENST00000475146 SF3B5Q9BWJ5 86 aaKnown RBP21.23■□□□□ 0.99
CPNE1-223ENST00000475146 FAM107BQ9H098 131 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 UBTD1Q9HAC8 227 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 PARPBPQ9NWS1 579 aa21.23■□□□□ 0.99
CPNE1-223ENST00000475146 LGI1O95970 557 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 LOXP28300 417 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-223ENST00000475146 NR1H2P55055 460 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 FAM91A1Q658Y4 838 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 C5orf46Q6UWT4 87 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 SPATA21Q7Z572 469 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 CALHM3Q86XJ0 350 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 P3H2Q8IVL5 708 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 VANGL1Q8TAA9 524 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-223ENST00000475146 HSD17B8Q92506 261 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 SLC38A4Q969I6 547 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 TAMM41Q96BW9 452 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 MCHR1Q99705 422 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 ELAC2Q9BQ52 826 aaKnown RBP21.22■□□□□ 0.99
CPNE1-223ENST00000475146 PTDSS2Q9BVG9 487 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 ASB6Q9NWX5 421 aa21.22■□□□□ 0.99
CPNE1-223ENST00000475146 A0A0B4J2E0 115 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 A0A1B0GX12 115 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 TPST2O60704 377 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 C8BP07358 591 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 GGT1P19440 569 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 SEC24CP53992 1094 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 FAPQ12884 760 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 NRF1Q16656 503 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 RP9Q8TA86 221 aaKnown RBP21.21■□□□□ 0.99
CPNE1-223ENST00000475146 FOXC2Q99958 501 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 NGBQ9NPG2 151 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 UPB1Q9UBR1 384 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 MALT1Q9UDY8 824 aa21.21■□□□□ 0.99
CPNE1-223ENST00000475146 IGKV1D-42A0A075B6H8 117 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 CIB4A0PJX0 185 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 CCT8L1PA6NM43 557 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 FTCDNL1E5RQL4 147 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 RAD51DO75771 328 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 VAMP5O95183 116 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 CD247P20963 164 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 PTNP21246 168 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 P2RY4P51582 365 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 FAM69AQ5T7M9 428 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 ERICH5Q6P6B1 374 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 CCDC80Q76M96 950 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 AAED1Q7RTV5 226 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 ZNF433Q8N7K0 673 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-223ENST00000475146 OR6T1Q8NGN1 323 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 TMEM45BQ96B21 275 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 ZNF385AQ96PM9 386 aaKnown RBP21.2■□□□□ 0.98
CPNE1-223ENST00000475146 NSRP1Q9H0G5 558 aaKnown RBP21.2■□□□□ 0.98
CPNE1-223ENST00000475146 USP22Q9UPT9 525 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 RASD1Q9Y272 281 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 OTOGQ6ZRI0 2925 aa21.2■□□□□ 0.98
CPNE1-223ENST00000475146 TRAV36DV7A0A075B6V5 113 aa21.19■□□□□ 0.98
CPNE1-223ENST00000475146 A0A087WUJ7 227 aa21.19■□□□□ 0.98
CPNE1-223ENST00000475146 OR2T1O43869 369 aa21.19■□□□□ 0.98
CPNE1-223ENST00000475146 FMO6PO60774 539 aa21.19■□□□□ 0.98
CPNE1-223ENST00000475146 COX4I1P13073 169 aa21.19■□□□□ 0.98
CPNE1-223ENST00000475146 CDH12P55289 794 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms