RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 C1orf140Q5VVS0 124 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 HBMQ6B0K9 141 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 C3orf33Q6P1S2 294 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 FKBP9P1Q75LS8 142 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 PIWIL3Q7Z3Z3 882 aaKnown RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 RANBP3LQ86VV4 465 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 CCDC71Q8IV32 467 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 LIX1LQ8IVB5 337 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 OFCC1Q8IZS5 231 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 PIK3C3Q8NEB9 887 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 MBD3L2Q8NHZ7 208 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 TMEM255BQ8WV15 326 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 CANT1Q8WVQ1 401 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 ITLN2Q8WWU7 325 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 ROBO4Q8WZ75 1007 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 LZICQ8WZA0 190 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 SLC47A1Q96FL8 570 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 SLC41A3Q96GZ6 507 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 CCDC120Q96HB5 630 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 DHRS1Q96LJ7 313 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 PRRC1Q96M27 445 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 MOGAT1Q96PD6 335 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 OR5B2Q96R09 309 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF300Q96RE9 604 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 POTEKPQ9BYX7 375 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 EVA1AQ9H8M9 152 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 CALHM2Q9HA72 323 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 NMNAT1Q9HAN9 279 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 TMEM27Q9HBJ8 222 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 IL1RAPQ9NPH3 570 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 DLL4Q9NR61 685 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 VNN3Q9NY84 501 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 SEC14L4Q9UDX3 406 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 Q9UFV3 132 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 RPS6KA6Q9UK32 745 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 SLC7A7Q9UM01 511 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 SAMD4AQ9UPU9 718 aaKnown RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 IGHV3-15A0A0B4J1V0 119 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 TRBV4-1A0A0J9YWV2 114 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 SLC22A20A6NK97 555 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 ELOA3DA6NLF2 546 aaPredicted RBP6.23□□□□□ -1.41
LIMD1-204ENST00000474665 AQP12BA6NM10 295 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 A8MVM7 634 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 C19orf84I3L1E1 186 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 CHP2O43745 196 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 PIP5K1CO60331 668 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 TNFSF13O75888 250 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 PMS2P2O95744 297 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 BGLAPP02818 100 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 HOXD4P09016 255 aaPredicted RBP6.23□□□□□ -1.41
LIMD1-204ENST00000474665 TFPIP10646 304 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 PNMTP11086 282 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 GABRA1P14867 456 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 RHCEP18577 417 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 FPR1P21462 350 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 EDNRAP25101 427 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 GCKP35557 465 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 CLK1P49759 484 aaKnown RBP6.23□□□□□ -1.41
LIMD1-204ENST00000474665 RASSF2P50749 326 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 MAP2K6P52564 334 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 UGT2B15P54855 530 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 CARD18P57730 90 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 RAC3P60763 192 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 FHL1Q13642 323 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 FLOT2Q14254 428 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF239Q16600 458 aaKnown RBP6.23□□□□□ -1.41
LIMD1-204ENST00000474665 ELOA3BQ3SY89 546 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 MTX3Q5HYI7 312 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 TBPL2Q6SJ96 375 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 NHLRC1Q6VVB1 395 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 B3GNT6Q6ZMB0 384 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 SLC46A3Q7Z3Q1 461 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 YTHDF3Q7Z739 585 aaKnown RBP6.23□□□□□ -1.41
LIMD1-204ENST00000474665 MEX3DQ86XN8 651 aaKnown RBP6.23□□□□□ -1.41
LIMD1-204ENST00000474665 CCDC103Q8IW40 242 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 WDFY1Q8IWB7 410 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 AQP12AQ8IXF9 295 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 PM20D2Q8IYS1 436 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 MEIOBQ8N635 442 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 ELOA3Q8NG57 546 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 SLC7A13Q8TCU3 470 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 STK35Q8TDR2 534 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 RNF128Q8TEB7 428 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 ABHD3Q8WU67 409 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 SLC25A43Q8WUT9 341 aaPredicted RBP6.23□□□□□ -1.41
LIMD1-204ENST00000474665 WNT2BQ93097 391 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 MCUR1Q96AQ8 359 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 DTNBP1Q96EV8 351 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 TRIB1Q96RU8 372 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 SEPHS2Q99611 448 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 TMEM43Q9BTV4 400 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 MMADHCQ9H3L0 296 aaPredicted RBP6.23□□□□□ -1.41
LIMD1-204ENST00000474665 RNF122Q9H9V4 155 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 MCCC2Q9HCC0 563 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 SERINC1Q9NRX5 453 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 C20orf141Q9NUB4 165 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 TRAPPC4Q9Y296 219 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 HDGFL3Q9Y3E1 203 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF175Q9Y473 711 aa6.23□□□□□ -1.41
LIMD1-204ENST00000474665 MAP1AP78559 2803 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms