RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DUSP3P51452 185 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TPTEP56180 551 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 CD69Q07108 199 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 MRPL23Q16540 153 aaKnown RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF658BQ4V348 819 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 CXorf66Q5JRM2 361 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 NKAPLQ5M9Q1 402 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TEX38Q6PEX7 206 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TTLL10Q6ZVT0 673 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 IL17RELQ6ZVW7 336 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SERPINA9Q86WD7 417 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 ZDHHC23Q8IYP9 409 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM123Q8N131 208 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 CENPSQ8N2Z9 138 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 KIAA0895Q8NCT3 520 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 OR2AP1Q8NGE2 309 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 OR5L1Q8NGL2 311 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 CYB5D2Q8WUJ1 264 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 CREB3L1Q96BA8 519 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 WDR89Q96FK6 387 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SFRP2Q96HF1 295 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 FUCA2Q9BTY2 467 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 COA1Q9GZY4 146 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 OR10A5Q9H207 317 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 ZDHHC6Q9H6R6 413 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 PLEKHA1Q9HB21 404 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 LRRC4CQ9HCJ2 640 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SLAMF7Q9NQ25 335 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 GLTPQ9NZD2 209 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC12A6Q9UHW9 1150 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 RNF150Q9ULK6 438 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 ICAM5Q9UMF0 924 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SNX24Q9Y343 169 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 HEMK1Q9Y5R4 338 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TGOLN2O43493 480 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 LDB2O43679 373 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SYNGR3O43761 229 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 UTS2O95399 124 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 MT-CYBP00156 380 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 DCNP07585 359 aaKnown RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 HOXB4P17483 251 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 EFNA1P20827 205 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 GNRHRP30968 328 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 CCKBRP32239 447 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 NPBWR1P48145 328 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 CSNK1A1P48729 337 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 EFNA5P52803 228 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 DLX5P56178 289 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 ERVK11-1P61568 191 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 GTF2BQ00403 316 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 IL5RAQ01344 420 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 PJVKQ0ZLH3 352 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 GRIK2Q13002 908 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 GK2Q14410 553 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SPA17Q15506 151 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TRAM1Q15629 374 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 RFX4Q33E94 735 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 LETMD1Q6P1Q0 360 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 FAM180AQ6UWF9 173 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 HACD2Q6Y1H2 254 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SH2D5Q6ZV89 423 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM179Q6ZVK1 233 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TMPRSS11FQ6ZWK6 438 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 GPBP1Q86WP2 473 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 PELI3Q8N2H9 469 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 STPG2Q8N412 459 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 LRRC75AQ8NAA5 344 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 FAM46DQ8NEK8 389 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM163Q8TC26 289 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 LGALS14Q8TCE9 139 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 OTUB1Q96FW1 271 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 ATG101Q9BSB4 218 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 THAP7Q9BT49 309 aaPredicted RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 MCRIP2Q9BUT9 160 aaKnown RBP5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 KCNK15Q9H427 330 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 IL1RL2Q9HB29 575 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 POPDC2Q9HBU9 364 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 ANKHQ9HCJ1 492 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 Q9N2J8 555 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 HMG20AQ9NP66 347 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 SMOXQ9NWM0 555 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 TAS2R14Q9NYV8 317 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 PIPOXQ9P0Z9 390 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 PYCARDQ9ULZ3 195 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 MEMO1Q9Y316 297 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 LRP12Q9Y561 859 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 LOC285556D6RIA3 1793 aa5.56□□□□□ -1.52
SMARCE1-208ENST00000474246 COL11A1P12107 1806 aaPredicted RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 VPS13AQ96RL7 3174 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 A0A1B0GVI7 797 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 HYKKA2RU49 373 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 TBC1D3FA6NER0 549 aaPredicted RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 AQP7P3A6NL99 342 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 VSTM2BA6NLU5 285 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 GJE1A6NN92 205 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 OR11H12B2RN74 326 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 HHLA1C9JL84 531 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 CLDN34H7C241 214 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 DSCR3O14972 297 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 C2P06681 752 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms