RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 RPS15AP62244 130 aaKnown RBP13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 LGALS3BPQ08380 585 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 OLFML2AQ68BL7 652 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 RGS7BPQ6MZT1 257 aaPredicted RBP13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 ALKAL2Q6UX46 152 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 NHLRC1Q6VVB1 395 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 USP53Q70EK8 1073 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 PAQR7Q86WK9 346 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 CDRT4Q8N9R6 151 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 PHYHIPQ92561 330 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 SERTAD3Q9UJW9 196 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 FBXL3Q9UKT7 428 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 ICAM5Q9UMF0 924 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 COPS3Q9UNS2 423 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 PCDHGA5Q9Y5G8 931 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 V9GY05 133 aa13.09□□□□□ -0.31
NHLRC3-204ENST00000473371 A0A0B4J2E0 115 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 A0A1B0GX12 115 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 PSMD9O00233 223 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 GNB5O14775 395 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 SELENOFO60613 162 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 PROS1P07225 676 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 CSF2RAP15509 400 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 NOGQ13253 232 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 EXOSC7Q15024 291 aaKnown RBP13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 TCEA2Q15560 299 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 ZNF626Q68DY1 528 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 LCN9Q8WX39 176 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 MRPL48Q96GC5 212 aaKnown RBP13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 ZNF578Q96N58 590 aaPredicted RBP13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 SERINC2Q96SA4 455 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 DUSP22Q9NRW4 184 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 DENND4AQ7Z401 1863 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 OR2M5A3KFT3 312 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 IDSB3KWA1 339 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 ARPC5O15511 151 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 LDB3O75112 727 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 PPM1BO75688 479 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 CD1AP06126 327 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 NMBP08949 121 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 WASP42768 502 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 PPP2CBP62714 309 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 PPP2CAP67775 309 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 HLXQ14774 488 aaPredicted RBP13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 OR6K6Q8NGW6 343 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 HSPA12BQ96MM6 686 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 TTYH1Q9H313 450 aaPredicted RBP13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 CHRNA9Q9UGM1 479 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 ING1Q9UK53 422 aaPredicted RBP13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 FBXL21Q9UKT6 434 aa13.08□□□□□ -0.32
NHLRC3-204ENST00000473371 SUSD5O60279 629 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 RP2O75695 350 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 SNAPC5O75971 98 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 NDUFB2O95178 105 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 IL5P05113 134 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 CEACAM5P06731 702 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 NGFRP08138 427 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 S100A11P31949 105 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 RPL4P36578 427 aaKnown RBP13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 PLAURQ03405 335 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 ILF3Q12906 894 aaKnown RBP eCLIP13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 ALG10BQ5I7T1 473 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 FHL5Q5TD97 284 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 AGBL4Q5VU57 503 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 ZAR1Q86SH2 424 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 OR14A16Q8NHC5 309 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 GINS4Q9BRT9 223 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 TMPRSS13Q9BYE2 586 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 TMEM74BQ9NUR3 256 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 DAPP1Q9UN19 280 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 ZNF281Q9Y2X9 895 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 LAMA3Q16787 3333 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 SNRPGP15A8MWD9 76 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 ACOT7O00154 380 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 GALR3O60755 368 aaPredicted RBP13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 OR2A4O95047 310 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 CDK2P24941 298 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 AK4P27144 223 aaPredicted RBP13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 SEC61A1P61619 476 aaKnown RBP13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 MRPS10P82664 201 aaKnown RBP13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 FHL1Q13642 323 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 PWWP2BQ6NUJ5 590 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 TMEFF1Q8IYR6 380 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 OR52B4Q8NGK2 314 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 ZNRF4Q8WWF5 429 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 C2orf42Q9NWW7 574 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 CXXC1Q9P0U4 656 aaPredicted RBP13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 OR5V1Q9UGF6 321 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 ADAM18Q9Y3Q7 739 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 NDUFB6O95139 128 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 RAB40ALP0C0E4 278 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 GRPRP30550 384 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 DIO1P49895 249 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 FGL2Q14314 439 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 GGTLC2Q14390 218 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 TMUB2Q71RG4 321 aa13.07□□□□□ -0.32
NHLRC3-204ENST00000473371 NT5CQ8TCD5 201 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms