RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ANKRD16Q6P6B7 361 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 C12orf54Q6X4T0 127 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 GRINAQ7Z429 371 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 R3HCC1LQ7Z5L2 792 aaKnown RBP8.32□□□□□ -1.08
MCF2L-223ENST00000473345 ANKRD46Q86W74 232 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 SVOPLQ8N434 492 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 C17orf78Q8N4C9 275 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 ANKRD42Q8N9B4 389 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 MIPOL1Q8TD10 442 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 SLC25A43Q8WUT9 341 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-223ENST00000473345 TMEM45BQ96B21 275 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 AURKBQ96GD4 344 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-223ENST00000473345 MAGEB18Q96M61 343 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 ZNF317Q96PQ6 595 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-223ENST00000473345 ALKBH3Q96Q83 286 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-223ENST00000473345 SLC38A2Q96QD8 506 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 RSPO3Q9BXY4 272 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-223ENST00000473345 NOX3Q9HBY0 568 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 SERINC1Q9NRX5 453 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 TMEM181Q9P2C4 612 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 CRNNQ9UBG3 495 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-223ENST00000473345 ZDHHC2Q9UIJ5 367 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 TMED5Q9Y3A6 229 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 TMED7Q9Y3B3 224 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 HDGFL3Q9Y3E1 203 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 FKBP7Q9Y680 259 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 DYSFO75923 2080 aa8.32□□□□□ -1.08
MCF2L-223ENST00000473345 NUP214P35658 2090 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-223ENST00000473345 RNF103-CHMP3A0A140T963 221 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 LIPT2A6NK58 231 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 TMEM229AB2RXF0 380 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 GPR171O14626 319 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 STX11O75558 287 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 BPGMP07738 259 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 CHRM4P08173 479 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 DAOP14920 347 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 HNF1AP20823 631 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 APEX1P27695 318 aaKnown RBP8.31□□□□□ -1.08
MCF2L-223ENST00000473345 TACR3P29371 465 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 MAGEA8P43361 318 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 PPOXP50336 477 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 IDH3GP51553 393 aaPredicted RBP8.31□□□□□ -1.08
MCF2L-223ENST00000473345 PRPS1P60891 318 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 SNRPD2P62316 118 aaKnown RBP8.31□□□□□ -1.08
MCF2L-223ENST00000473345 EIF3MQ7L2H7 374 aaKnown RBP8.31□□□□□ -1.08
MCF2L-223ENST00000473345 EPHX4Q8IUS5 362 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 ANKFN1Q8N957 763 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 LINC01356Q8N9X3 169 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 OR9K2Q8NGE7 335 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 ZNF563Q8TA94 476 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 XAGE5Q8WWM1 108 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 TMEM234Q8WY98 164 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 ROPN1LQ96C74 230 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 SLC35G5Q96KT7 338 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 DUSP26Q9BV47 211 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 RACGAP1Q9H0H5 632 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 SLC38A1Q9H2H9 487 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 TPK1Q9H3S4 243 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 METTL17Q9H7H0 456 aaPredicted RBP8.31□□□□□ -1.08
MCF2L-223ENST00000473345 UPB1Q9UBR1 384 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 SEC14L4Q9UDX3 406 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 TRAPPC4Q9Y296 219 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 SLC9A8Q9Y2E8 581 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 CHST2Q9Y4C5 530 aa8.31□□□□□ -1.08
MCF2L-223ENST00000473345 SH3PXD2BA1X283 911 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 B9A039 149 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 hCG_2039718K7EN88 272 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 ANKRD28O15084 1053 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 CFLARO15519 480 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 DNPH1O43598 174 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 RRP9O43818 475 aaKnown RBP8.3□□□□□ -1.08
MCF2L-223ENST00000473345 TRIM13O60858 407 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 COL8A2P25067 703 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 COMPP49747 757 aaPredicted RBP8.3□□□□□ -1.08
MCF2L-223ENST00000473345 GNGT1P63211 74 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 KCNJ10P78508 379 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 GABPB1Q06547 395 aaPredicted RBP8.3□□□□□ -1.08
MCF2L-223ENST00000473345 HNRNPA0Q13151 305 aaKnown RBP8.3□□□□□ -1.08
MCF2L-223ENST00000473345 CEACAM7Q14002 265 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 SYPL1Q16563 259 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 PGS1Q32NB8 556 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 ELFN2Q5R3F8 820 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 PHYHD1Q5SRE7 291 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 OTUD3Q5T2D3 398 aaPredicted RBP8.3□□□□□ -1.08
MCF2L-223ENST00000473345 HHATQ5VTY9 493 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 SAXO2Q658L1 398 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 PAQR6Q6TCH4 344 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 THSD4Q6ZMP0 1018 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 AAED1Q7RTV5 226 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 KDM8Q8N371 416 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 ZNF786Q8N393 782 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 MGARPQ8TDB4 240 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 YIPF5Q969M3 257 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 KATNB1Q9BVA0 655 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 NARFLQ9H6Q4 476 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 LPAR2Q9HBW0 351 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 ESM1Q9NQ30 184 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 RLIMQ9NVW2 624 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 MYEF2Q9P2K5 600 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms