RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-226	ENST00000473066	PNMT	P11086	282 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	IGHV1-2	P23083	117 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	EDNRA	P25101	427 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	LOX	P28300	417 aa	Predicted RBP	13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	HOXC12	P31275	282 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	FAP	Q12884	760 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	CYLC2	Q14093	348 aa	Predicted RBP	13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	SLC17A1	Q14916	467 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	ALG10B	Q5I7T1	473 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	TIMM23B	Q5SRD1	257 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	INTS11	Q5TA45	600 aa	Known RBP	13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	RETREG3	Q86VR2	466 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	P2RY8	Q86VZ1	359 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	P3H2	Q8IVL5	708 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	OR9K2	Q8NGE7	335 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	SLC26A7	Q8TE54	656 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	SLC38A4	Q969I6	547 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	PIP5K1A	Q99755	562 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	SH3GL1	Q99961	368 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	TMEM27	Q9HBJ8	222 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	TAS2R16	Q9NYV7	291 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066	MALT1	Q9UDY8	824 aa		13.78	□□□□□ -0.2
MRPL55-226	ENST00000473066		A0A1B0GWA3	101 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	KRT33A	O76009	404 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	CD99	P14209	185 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	GUCY1A3	Q02108	690 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	C6orf89	Q6UWU4	347 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	AAED1	Q7RTV5	226 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	PATL1	Q86TB9	770 aa	Known RBP	13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	LSMEM1	Q8N8F7	131 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	MFSD8	Q8NHS3	518 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	TMEM171	Q8WVE6	324 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	TMEM45B	Q96B21	275 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	SLC25A36	Q96CQ1	311 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	SLC47A1	Q96FL8	570 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	AKAP9	Q99996	3911 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	PIF1	Q9H611	641 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	RASD1	Q9Y272	281 aa		13.77	□□□□□ -0.21
MRPL55-226	ENST00000473066	CAD	P27708	2225 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	OR5H1	A6NKK0	313 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	HS3ST1	O14792	307 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	MRAS	O14807	208 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	OR2T1	O43869	369 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	TPST1	O60507	370 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	PCGF2	P35227	344 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	RPS5	P46782	204 aa	Known RBP	13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	NKX6-1	P78426	367 aa	Predicted RBP	13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	IL1RL1	Q01638	556 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	TGFBR3	Q03167	851 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	KLF10	Q13118	480 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	SELPLG	Q14242	412 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	ADRM1	Q16186	407 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	GLIPR1L2	Q4G1C9	344 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	COQ5	Q5HYK3	327 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	NCMAP	Q5T1S8	102 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	SHE	Q5VZ18	495 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	FAM91A1	Q658Y4	838 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	OR7E24	Q6IFN5	339 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	ULK3	Q6PHR2	472 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	KLHL24	Q6TFL4	600 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	PTOV1	Q86YD1	416 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	POMGNT2	Q8NAT1	580 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	SMYD1	Q8NB12	490 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	PCYOX1L	Q8NBM8	494 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	OR10A6	Q8NH74	314 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	EPYC	Q99645	322 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	SLCO5A1	Q9H2Y9	848 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	CAPN7	Q9Y6W3	813 aa		13.76	□□□□□ -0.21
MRPL55-226	ENST00000473066	ITPR3	Q14573	2671 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	AIM2	O14862	343 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	AKAP8	O43823	692 aa	Known RBP	13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	NPIPB7	O75200	414 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	MFN2	O95140	757 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	PLAU	P00749	431 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	OPN1SW	P03999	348 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	HTR2A	P28223	471 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	PCBP3	P57721	371 aa	Known RBP	13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	DMTN	Q08495	405 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	MFSD13A	Q14CX5	517 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	FAM69A	Q5T7M9	428 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	REP15	Q6BDI9	236 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	KLHL17	Q6TDP4	642 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	NET1	Q7Z628	596 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	LSR	Q86X29	649 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	SNX32	Q86XE0	403 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	LRRC75A-AS1	Q8N1F1	130 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	ZNF611	Q8N823	705 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	OR52N5	Q8NH56	324 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	RASSF5	Q8WWW0	418 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	FBXW5	Q969U6	566 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	ECSIT	Q9BQ95	431 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	TMEM204	Q9BSN7	226 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	CXorf56	Q9H5V9	222 aa		13.75	□□□□□ -0.21
MRPL55-226	ENST00000473066	CCDC134	Q9H6E4	229 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms