RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 OR51I1Q9H343 314 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 TMEM181Q9P2C4 612 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 PSMC3IPQ9P2W1 217 aaPredicted RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 CRNNQ9UBG3 495 aaPredicted RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 UPB1Q9UBR1 384 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 OSGIN1Q9UJX0 560 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 HDGFL3Q9Y3E1 203 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 PCDHB14Q9Y5E9 798 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 NBEAL2Q6ZNJ1 2754 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 TMED7-TICAM2A0A0A6YYA0 188 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 POM121CA8CG34 1229 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 TMEM229AB2RXF0 380 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 B4DSR2 109 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 DNPH1O43598 174 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 SKAP2O75563 359 aaPredicted RBP8.06□□□□□ -1.12
VCL-204ENST00000472585 LGI1O95970 557 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 CECR9P0C854 216 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 NEFHP12036 1026 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 DAOP14920 347 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 THBS4P35443 961 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 HPCAL1P37235 193 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 MAGEA8P43361 318 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 CLK1P49759 484 aaKnown RBP8.06□□□□□ -1.12
VCL-204ENST00000472585 IDH3GP51553 393 aaPredicted RBP8.06□□□□□ -1.12
VCL-204ENST00000472585 KCNJ10P78508 379 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 NAAAQ02083 359 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 CKAP4Q07065 602 aaKnown RBP8.06□□□□□ -1.12
VCL-204ENST00000472585 LSM12Q3MHD2 195 aaKnown RBP8.06□□□□□ -1.12
VCL-204ENST00000472585 TBRG1Q3YBR2 411 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 CCDC153Q494R4 210 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 OR4F3Q6IEY1 312 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 C1orf229Q6ZS94 237 aaPredicted RBP8.06□□□□□ -1.12
VCL-204ENST00000472585 USP43Q70EL4 1123 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 TRMT10CQ7L0Y3 403 aaKnown RBP8.06□□□□□ -1.12
VCL-204ENST00000472585 GRINAQ7Z429 371 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 DDIASQ8IXT1 998 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 OR1K1Q8NGR3 316 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 ZNF563Q8TA94 476 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 AGR3Q8TD06 166 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 MIPOL1Q8TD10 442 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 XAGE5Q8WWM1 108 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 MRPL24Q96A35 216 aaKnown RBP8.06□□□□□ -1.12
VCL-204ENST00000472585 TMEM45BQ96B21 275 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 KCNS3Q9BQ31 491 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 DUSP26Q9BV47 211 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 MECRQ9BV79 373 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 RAB1BQ9H0U4 201 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 USP22Q9UPT9 525 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 TMED7Q9Y3B3 224 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 GRIP1Q9Y3R0 1128 aa8.06□□□□□ -1.12
VCL-204ENST00000472585 A0A096LPE4 126 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 A0A1W2PPZ6 126 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 CFLARO15519 480 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 TRIM13O60858 407 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 UPK3AO75631 287 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 AKR7A3O95154 331 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 IGLV1-44P01699 117 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 KRT16P08779 473 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 G6PDP11413 515 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 TACR3P29371 465 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 ALDH3A1P30838 453 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 SELENOPP49908 381 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 PPOXP50336 477 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 SLC35A1P78382 337 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 FOXL1Q12952 345 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 CCNIQ14094 377 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 MAPK11Q15759 364 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 WHAMMP3Q1A5X7 153 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
VCL-204ENST00000472585 ZCCHC23Q6ZST2 131 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 AAED1Q7RTV5 226 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 EPHX4Q8IUS5 362 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 GSPT2Q8IYD1 628 aaKnown RBP8.05□□□□□ -1.12
VCL-204ENST00000472585 CDK20Q8IZL9 346 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 C4orf33Q8N1A6 199 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 ZNF786Q8N393 782 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 SVOPLQ8N434 492 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 TEX29Q8N6K0 151 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 OR9K2Q8NGE7 335 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 ARL8AQ96BM9 186 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 ZNF837Q96EG3 531 aaPredicted RBP8.05□□□□□ -1.12
VCL-204ENST00000472585 PARPBPQ9NWS1 579 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 ZDHHC2Q9UIJ5 367 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 FBXO9Q9UK97 447 aaPredicted RBP8.05□□□□□ -1.12
VCL-204ENST00000472585 SLC9A8Q9Y2E8 581 aa8.05□□□□□ -1.12
VCL-204ENST00000472585 SH3PXD2BA1X283 911 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 LIPT2A6NK58 231 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 DUXAA6NLW8 204 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 TMEM114B3SHH9 223 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 HMGN4O00479 90 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 ANKRD28O15084 1053 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 ZNF208O43345 1280 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 LYPLA1O75608 230 aaPredicted RBP8.04□□□□□ -1.12
VCL-204ENST00000472585 WNT11O96014 354 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 GUSBP08236 651 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 IFNGR1P15260 489 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 KRT4P19013 534 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 PRPS1L1P21108 318 aa8.04□□□□□ -1.12
VCL-204ENST00000472585 EPHA1P21709 976 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms