RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 HTR3AP46098 478 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 TMEM33P57088 247 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 RPS26P62854 115 aaKnown RBP16.36■□□□□ 0.21
SORT1-203ENST00000471996 MYBPC1Q00872 1141 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 LSM12Q3MHD2 195 aaKnown RBP16.36■□□□□ 0.21
SORT1-203ENST00000471996 LIPMQ5VYY2 423 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 AP1ARQ63HQ0 302 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 LSRQ86X29 649 aaPredicted RBP16.36■□□□□ 0.21
SORT1-203ENST00000471996 BPIFB2Q8N4F0 458 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 OR5AK3PQ8NH89 298 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 OIT3Q8WWZ8 545 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 RDH5Q92781 318 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 TMPRSS13Q9BYE2 586 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 NELFAQ9H3P2 528 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 SERHL2Q9H4I8 314 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 SLC52A3Q9NQ40 469 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 REV1Q9UBZ9 1251 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 ZNF281Q9Y2X9 895 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 TMED7Q9Y3B3 224 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 CMAHPQ9Y471 501 aa16.36■□□□□ 0.21
SORT1-203ENST00000471996 LSM1O15116 133 aaKnown RBP16.35■□□□□ 0.21
SORT1-203ENST00000471996 SYNGR3O43761 229 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 MYL2P10916 166 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 ANPEPP15144 967 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 MATN1P21941 496 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 IDH2P48735 452 aaKnown RBP16.35■□□□□ 0.21
SORT1-203ENST00000471996 EVX1P49640 407 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 DAG1Q14118 895 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 ATP6AP1LQ52LC2 224 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 CFAP157Q5JU67 520 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 ZYG11AQ6WRX3 759 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 RNF165Q6ZSG1 346 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 LINGO2Q7L985 606 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 NATD1Q8N6N6 113 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 TMEM99Q8N816 258 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 ALKBH3Q96Q83 286 aaPredicted RBP16.35■□□□□ 0.21
SORT1-203ENST00000471996 MS4A5Q9H3V2 200 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 TUBB1Q9H4B7 451 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 EXOSC3Q9NQT5 275 aaKnown RBP16.35■□□□□ 0.21
SORT1-203ENST00000471996 ZNF275Q9NSD4 429 aaPredicted RBP16.35■□□□□ 0.21
SORT1-203ENST00000471996 OSGIN1Q9UJX0 560 aa16.35■□□□□ 0.21
SORT1-203ENST00000471996 ZC3H12DA2A288 527 aaKnown RBP16.34■□□□□ 0.21
SORT1-203ENST00000471996 M0R233 179 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 AKR7A3O95154 331 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 LINC00032P0C843 101 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 SELENOPP49908 381 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 POLR2HP52434 150 aaKnown RBP16.34■□□□□ 0.21
SORT1-203ENST00000471996 SNTB2Q13425 540 aaKnown RBP16.34■□□□□ 0.21
SORT1-203ENST00000471996 GALNTL6Q49A17 601 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 GPAT4Q86UL3 456 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 RIBC1Q8N443 379 aaPredicted RBP16.34■□□□□ 0.21
SORT1-203ENST00000471996 IL17RDQ8NFM7 739 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 YIPF5Q969M3 257 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 NTN4Q9HB63 628 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 ARMCX1Q9P291 453 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 EMCNQ9ULC0 261 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 PPIAL4AQ9Y536 164 aa16.34■□□□□ 0.21
SORT1-203ENST00000471996 A0A087WUV0 522 aaPredicted RBP16.33■□□□□ 0.2
SORT1-203ENST00000471996 A0A0G2JMP0 313 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 A0A0X1KG70 313 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 EXOC1LA0A1B0GW35 172 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 AQP7P3A6NL99 342 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 PIP5K1BO14986 540 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 PPIHO43447 177 aaKnown RBP16.33■□□□□ 0.2
SORT1-203ENST00000471996 UPK3AO75631 287 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 ADRA2CP18825 462 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 TCN1P20061 433 aaPredicted RBP16.33■□□□□ 0.2
SORT1-203ENST00000471996 GCAP28676 217 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 MAP2K6P52564 334 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 SH3BGRP55822 239 aaPredicted RBP16.33■□□□□ 0.2
SORT1-203ENST00000471996 DNAJB13P59910 316 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 ETF1P62495 437 aaKnown RBP16.33■□□□□ 0.2
SORT1-203ENST00000471996 PLAURQ03405 335 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 CEACAM7Q14002 265 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 MSMPQ1L6U9 139 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 KRT80Q6KB66 452 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 ACSM5Q6NUN0 579 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 C16orf62Q7Z3J2 963 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 C6orf120Q7Z4R8 191 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 ARFGAP2Q8N6H7 521 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 OR4M2Q8NGB6 313 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 NANPQ8TBE9 248 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 ACMSDQ8TDX5 336 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 COQ8BQ96D53 544 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 MRPL37Q9BZE1 423 aaKnown RBP16.33■□□□□ 0.2
SORT1-203ENST00000471996 TSPYL1Q9H0U9 437 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 UNKLQ9H9P5 680 aaKnown RBP16.33■□□□□ 0.2
SORT1-203ENST00000471996 NOX3Q9HBY0 568 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 ATAD3AQ9NVI7 634 aa16.33■□□□□ 0.2
SORT1-203ENST00000471996 LIPT2A6NK58 231 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 TMEM114B3SHH9 223 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 AZIN1O14977 448 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 CFLARO15519 480 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 GPIP06744 558 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 GUSBP08236 651 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 TACR3P29371 465 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 ARR3P36575 388 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 HBA1P69905 142 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 KCNJ10P78508 379 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 MRPS11P82912 194 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms