RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 B3GAT3O94766 335 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 OR4F21O95013 312 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 OPN1LWP04000 364 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 PNMTP11086 282 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 IL10P22301 178 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 FMO3P31513 532 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 DLX1P56177 255 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 IL1RL1Q01638 556 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 KLHL30Q0D2K2 578 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 STK11Q15831 433 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 MAPK6Q16659 721 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 RFX4Q33E94 735 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 PARP10Q53GL7 1025 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 LRRC10Q5BKY1 277 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 NIPAL3Q6P499 406 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 C19orf35Q6ZS72 473 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 SHISA6Q6ZSJ9 500 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 PRSS41Q7RTY9 318 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 ZNF571Q7Z3V5 609 aaPredicted RBP1.68□□□□□ -2.14
RBM39-228ENST00000471635 RDH10Q8IZV5 341 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 OR10G3Q8NGC4 313 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 EXOSC8Q96B26 276 aaKnown RBP1.68□□□□□ -2.14
RBM39-228ENST00000471635 BMFQ96LC9 184 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 VPS35Q96QK1 796 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 KCNK16Q96T55 309 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 P2RY13Q9BPV8 354 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 MRPL13Q9BYD1 178 aaKnown RBP1.68□□□□□ -2.14
RBM39-228ENST00000471635 DHX33Q9H6R0 707 aaKnown RBP1.68□□□□□ -2.14
RBM39-228ENST00000471635 OR12D3Q9UGF7 316 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 B9D1Q9UPM9 204 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 RFNGQ9Y644 331 aa1.68□□□□□ -2.14
RBM39-228ENST00000471635 SCN1AP35498 2009 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 CLSPNQ9HAW4 1339 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 ATP10DQ9P241 1426 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 IGHV1OR21-1A0A087WYE8 117 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 IGKV3D-11A0A0A0MRZ8 115 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 IGHV2-70DA0A0C4DH43 119 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 AGPAT2O15120 278 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 CHADO15335 359 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 PRPSAP2O60256 369 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 MBD3O95983 291 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 SHMT2P34897 504 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 UBE2AP49459 152 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 SPIBQ01892 262 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 COX19Q49B96 90 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 ZNF311Q5JNZ3 666 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 DNLZQ5SXM8 178 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 GPRC6AQ5T6X5 926 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 C12orf60Q5U649 245 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 ZNF620Q6ZNG0 422 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 CENPUQ71F23 418 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 CATSPER4Q7RTX7 472 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 PAQR7Q86WK9 346 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 FTMTQ8N4E7 242 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 LINC00304Q8N9R0 145 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 PNPT1Q8TCS8 783 aaKnown RBP1.67□□□□□ -2.14
RBM39-228ENST00000471635 ZFP90Q8TF47 636 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 FICDQ9BVA6 458 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 KRT23Q9C075 422 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 C20orf85Q9H1P6 137 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 C1orf21Q9H246 121 aa1.67□□□□□ -2.14
RBM39-228ENST00000471635 FCGBPQ9Y6R7 5405 aaPredicted RBP1.67□□□□□ -2.14
RBM39-228ENST00000471635 C17orf51A8MQB3 221 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 F8WDY8 70 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 RPL36A-HNRNPH2H7BZ11 118 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 IGLV2-23P01705 113 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 ANXA13P27216 316 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 MAPK3P27361 379 aaPredicted RBP1.66□□□□□ -2.14
RBM39-228ENST00000471635 CCND2P30279 289 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 NAPAP54920 295 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 GMFBP60983 142 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 PDZK1IP1Q13113 114 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 TIGD3Q6B0B8 471 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 CNSTQ6PJW8 725 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 CBLN3Q6UW01 205 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 TPRA1Q86W33 373 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 RAET1EQ8TD07 263 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 AKR1E2Q96JD6 320 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 SIAEQ9HAT2 523 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 ZNF222Q9UK12 451 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 CARMIL1Q5VZK9 1371 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 SH3TC1Q8TE82 1336 aa1.66□□□□□ -2.14
RBM39-228ENST00000471635 MYO16Q9Y6X6 1858 aa1.65□□□□□ -2.14
RBM39-228ENST00000471635 CTAGE5O15320 804 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 CBR3O75828 277 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 ADCY5O95622 1261 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 CA1P00915 261 aaPredicted RBP1.65□□□□□ -2.15
RBM39-228ENST00000471635 TLX1NBP0CAT3 122 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 PPIAL4GP0DN37 164 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 ARF4P18085 180 aaPredicted RBP1.65□□□□□ -2.15
RBM39-228ENST00000471635 PGAM1P18669 254 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 TPSB2P20231 275 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 CYP2F1P24903 491 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 CD34P28906 385 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 KIF5BP33176 963 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 KIR2DS4P43632 304 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 ARRB1P49407 418 aaPredicted RBP1.65□□□□□ -2.15
RBM39-228ENST00000471635 EWSR1Q01844 656 aaKnown RBP eCLIP1.65□□□□□ -2.15
RBM39-228ENST00000471635 TPSAB1Q15661 275 aa1.65□□□□□ -2.15
RBM39-228ENST00000471635 ATP6AP1Q15904 470 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms