RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MPP4Q96JB8 637 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 EPYCQ99645 322 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 PTDSS2Q9BVG9 487 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 SF3B5Q9BWJ5 86 aaKnown RBP13.6□□□□□ -0.23
SDC3-203ENST00000471567 KCNN3Q9UGI6 736 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 CD300AQ9UGN4 299 aa13.6□□□□□ -0.23
SDC3-203ENST00000471567 AQP7P3A6NL99 342 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 ZNF814B7Z6K7 855 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 FTCDNL1E5RQL4 147 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 VAMP5O95183 116 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 LYPD3O95274 346 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 T-ENOLP0DO92 83 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 TNFRSF1BP20333 461 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 CPOXP36551 454 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 RPS5P46782 204 aaKnown RBP13.59□□□□□ -0.23
SDC3-203ENST00000471567 MFSD13AQ14CX5 517 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
SDC3-203ENST00000471567 FAM69AQ5T7M9 428 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 BEND4Q6ZU67 534 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 TRPM8Q7Z2W7 1104 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 NUFIP2Q7Z417 695 aaKnown RBP13.59□□□□□ -0.23
SDC3-203ENST00000471567 GALNT5Q7Z7M9 940 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 CCDC103Q8IW40 242 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 ARHGAP24Q8N264 748 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 TMEM99Q8N816 258 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 TAAR8Q969N4 342 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 ZNF300Q96RE9 604 aaPredicted RBP13.59□□□□□ -0.23
SDC3-203ENST00000471567 GORASP2Q9H8Y8 452 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 RPS6KA6Q9UK32 745 aa13.59□□□□□ -0.23
SDC3-203ENST00000471567 SETXQ7Z333 2677 aaKnown RBP13.58□□□□□ -0.23
SDC3-203ENST00000471567 AKR7A3O95154 331 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 OR5F1O95221 314 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 ZNF682O95780 498 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 SERPINA1P01009 418 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 THY1P04216 161 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 THRBP10828 461 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 POU2F1P14859 743 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 NCK1P16333 377 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 KIR2DL3P43628 341 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 OR1E2P47887 323 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 OR3A2P47893 321 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 SLC17A1Q14916 467 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 IFI44LQ53G44 452 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 TFAP2EQ6VUC0 442 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 DEF8Q6ZN54 512 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 TSPYL5Q86VY4 417 aaPredicted RBP13.58□□□□□ -0.24
SDC3-203ENST00000471567 RNF148Q8N7C7 305 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 RBM15BQ8NDT2 890 aaKnown RBP13.58□□□□□ -0.24
SDC3-203ENST00000471567 FAM222BQ8WU58 562 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 GEMIN6Q8WXD5 167 aaKnown RBP13.58□□□□□ -0.24
SDC3-203ENST00000471567 SLC25A36Q96CQ1 311 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 C14orf79Q96F83 325 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 SLC41A3Q96GZ6 507 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 SLC19A3Q9BZV2 496 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 C1orf21Q9H246 121 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 C12orf49Q9H741 205 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 EGFL7Q9UHF1 273 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 MAGEL2Q9UJ55 1249 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 SLC7A7Q9UM01 511 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 MPDZO75970 2070 aa13.58□□□□□ -0.24
SDC3-203ENST00000471567 UNC79Q9P2D8 2635 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 TUBAL3A6NHL2 446 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 RAMP1O60894 148 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 CNOT4O95628 575 aaKnown RBP13.57□□□□□ -0.24
SDC3-203ENST00000471567 IFNW1P05000 195 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 GTF2E2P29084 291 aaKnown RBP13.57□□□□□ -0.24
SDC3-203ENST00000471567 IFNA8P32881 189 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 P2RY4P51582 365 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 TAS2R41P59536 307 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 FAM27E3Q08E93 113 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 TMEM225Q6GV28 225 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 TTC33Q6PID6 262 aaPredicted RBP13.57□□□□□ -0.24
SDC3-203ENST00000471567 FKBP9P1Q75LS8 142 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 GDF7Q7Z4P5 450 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 VTCN1Q7Z7D3 282 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 ZNF295-AS1Q8N0V1 137 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 ZNF426Q9BUY5 554 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 DCAF13Q9NV06 445 aaKnown RBP13.57□□□□□ -0.24
SDC3-203ENST00000471567 PARPBPQ9NWS1 579 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 RIMS3Q9UJD0 308 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 SAMD4AQ9UPU9 718 aaKnown RBP13.57□□□□□ -0.24
SDC3-203ENST00000471567 RASD1Q9Y272 281 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 B3GALT5Q9Y2C3 310 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 NOSIPQ9Y314 301 aaKnown RBP13.57□□□□□ -0.24
SDC3-203ENST00000471567 CORINQ9Y5Q5 1042 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 FLVCR1Q9Y5Y0 555 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 ADGRG4Q8IZF6 3080 aa13.57□□□□□ -0.24
SDC3-203ENST00000471567 C16orf97H3BN30 126 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 MT-ATP6P00846 226 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 TCN1P20061 433 aaPredicted RBP13.56□□□□□ -0.24
SDC3-203ENST00000471567 SSTR2P30874 369 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 UGT2B10P36537 528 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 RBM34P42696 430 aaKnown RBP13.56□□□□□ -0.24
SDC3-203ENST00000471567 ST3GAL3Q11203 375 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 PIN1Q13526 163 aaPredicted RBP13.56□□□□□ -0.24
SDC3-203ENST00000471567 POU4F3Q15319 338 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 EXOC3L2Q2M3D2 409 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 WDR88Q6ZMY6 472 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 RINLQ6ZS11 566 aa13.56□□□□□ -0.24
SDC3-203ENST00000471567 H1FNTQ75WM6 255 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms