RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TNFRSF13CQ96RJ3 184 aa8.81□□□□□ -1
CCM2-204ENST00000470837 GPA33Q99795 319 aa8.81□□□□□ -1
CCM2-204ENST00000470837 NAA11Q9BSU3 229 aaPredicted RBP8.81□□□□□ -1
CCM2-204ENST00000470837 UBQLN3Q9H347 655 aa8.81□□□□□ -1
CCM2-204ENST00000470837 ALKBH4Q9NXW9 302 aa8.81□□□□□ -1
CCM2-204ENST00000470837 IL20Q9NYY1 176 aa8.81□□□□□ -1
CCM2-204ENST00000470837 REV1Q9UBZ9 1251 aa8.81□□□□□ -1
CCM2-204ENST00000470837 NDRG4Q9ULP0 352 aaKnown RBP8.81□□□□□ -1
CCM2-204ENST00000470837 SIGLEC7Q9Y286 467 aa8.81□□□□□ -1
CCM2-204ENST00000470837 B3GNT3Q9Y2A9 372 aa8.81□□□□□ -1
CCM2-204ENST00000470837 SLC6A5Q9Y345 797 aa8.81□□□□□ -1
CCM2-204ENST00000470837 HRH3Q9Y5N1 445 aa8.81□□□□□ -1
CCM2-204ENST00000470837 SPTBN4Q9H254 2564 aa8.8□□□□□ -1
CCM2-204ENST00000470837 TRGV5A0A0B4J1U4 118 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ZC3H12DA2A288 527 aaKnown RBP8.8□□□□□ -1
CCM2-204ENST00000470837 SNTNA6NMZ2 147 aa8.8□□□□□ -1
CCM2-204ENST00000470837 RIIAD1A6NNX1 92 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ZAR1LA6NP61 321 aa8.8□□□□□ -1
CCM2-204ENST00000470837 B4DXG7 233 aa8.8□□□□□ -1
CCM2-204ENST00000470837 EIF1AYO14602 144 aaKnown RBP8.8□□□□□ -1
CCM2-204ENST00000470837 SEC14L5O43304 696 aa8.8□□□□□ -1
CCM2-204ENST00000470837 EIF1BO60739 113 aaKnown RBP8.8□□□□□ -1
CCM2-204ENST00000470837 NPIPB7O75200 414 aa8.8□□□□□ -1
CCM2-204ENST00000470837 GLSO94925 669 aaPredicted RBP8.8□□□□□ -1
CCM2-204ENST00000470837 CLIC3O95833 236 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ACTL6AO96019 429 aa8.8□□□□□ -1
CCM2-204ENST00000470837 BGLAPP02818 100 aa8.8□□□□□ -1
CCM2-204ENST00000470837 OPN1LWP04000 364 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ASAH2BP0C7U1 165 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ADORA3P0DMS8 318 aa8.8□□□□□ -1
CCM2-204ENST00000470837 PAICSP22234 425 aaKnown RBP8.8□□□□□ -1
CCM2-204ENST00000470837 GRPRP30550 384 aa8.8□□□□□ -1
CCM2-204ENST00000470837 RPS3AP61247 264 aaKnown RBP8.8□□□□□ -1
CCM2-204ENST00000470837 MYBPC1Q00872 1141 aa8.8□□□□□ -1
CCM2-204ENST00000470837 SNAPC1Q16533 368 aa8.8□□□□□ -1
CCM2-204ENST00000470837 SGCBQ16585 318 aa8.8□□□□□ -1
CCM2-204ENST00000470837 TMEM44Q2T9K0 475 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ALG10Q5BKT4 473 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ZNF691Q5VV52 312 aa8.8□□□□□ -1
CCM2-204ENST00000470837 C1QL3Q5VWW1 255 aa8.8□□□□□ -1
CCM2-204ENST00000470837 SLX4IPQ5VYV7 408 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ARHGAP11AQ6P4F7 1023 aa8.8□□□□□ -1
CCM2-204ENST00000470837 DPY19L2P2Q6ZN68 376 aa8.8□□□□□ -1
CCM2-204ENST00000470837 TMPPEQ6ZT21 453 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ESPNLQ6ZVH7 1005 aa8.8□□□□□ -1
CCM2-204ENST00000470837 H1FNTQ75WM6 255 aaPredicted RBP8.8□□□□□ -1
CCM2-204ENST00000470837 SLC46A3Q7Z3Q1 461 aa8.8□□□□□ -1
CCM2-204ENST00000470837 MARVELD2Q8N4S9 558 aa8.8□□□□□ -1
CCM2-204ENST00000470837 LRRC17Q8N6Y2 441 aa8.8□□□□□ -1
CCM2-204ENST00000470837 SCAIQ8N9R8 606 aa8.8□□□□□ -1
CCM2-204ENST00000470837 SNRNP27Q8WVK2 155 aaKnown RBP8.8□□□□□ -1
CCM2-204ENST00000470837 TRUB1Q8WWH5 349 aaKnown RBP8.8□□□□□ -1
CCM2-204ENST00000470837 ZNF524Q96C55 264 aa8.8□□□□□ -1
CCM2-204ENST00000470837 DNAJA3Q96EY1 480 aa8.8□□□□□ -1
CCM2-204ENST00000470837 Q96MT0 163 aa8.8□□□□□ -1
CCM2-204ENST00000470837 MOGAT1Q96PD6 335 aa8.8□□□□□ -1
CCM2-204ENST00000470837 NR1H4Q96RI1 486 aaPredicted RBP8.8□□□□□ -1
CCM2-204ENST00000470837 PITX2Q99697 317 aa8.8□□□□□ -1
CCM2-204ENST00000470837 MFRPQ9BY79 579 aa8.8□□□□□ -1
CCM2-204ENST00000470837 SLC25A19Q9HC21 320 aa8.8□□□□□ -1
CCM2-204ENST00000470837 ACKR4Q9NPB9 350 aa8.8□□□□□ -1
CCM2-204ENST00000470837 PNPLA3Q9NST1 481 aa8.8□□□□□ -1
CCM2-204ENST00000470837 CLN6Q9NWW5 311 aa8.8□□□□□ -1
CCM2-204ENST00000470837 MRPL39Q9NYK5 338 aaKnown RBP8.8□□□□□ -1
CCM2-204ENST00000470837 TVP23BQ9NYZ1 205 aa8.8□□□□□ -1
CCM2-204ENST00000470837 H2AFY2Q9P0M6 372 aaPredicted RBP8.8□□□□□ -1
CCM2-204ENST00000470837 GRHPRQ9UBQ7 328 aa8.8□□□□□ -1
CCM2-204ENST00000470837 TUBD1Q9UJT1 453 aa8.8□□□□□ -1
CCM2-204ENST00000470837 BLOC1S6Q9UL45 172 aa8.8□□□□□ -1
CCM2-204ENST00000470837 TRAPPC4Q9Y296 219 aa8.8□□□□□ -1
CCM2-204ENST00000470837 B3GALT5Q9Y2C3 310 aa8.8□□□□□ -1
CCM2-204ENST00000470837 CSAG2Q9Y5P2 127 aa8.8□□□□□ -1
CCM2-204ENST00000470837 A0A1W2PNR3 127 aa8.79□□□□□ -1
CCM2-204ENST00000470837 A0A1W2PRG6 482 aa8.79□□□□□ -1
CCM2-204ENST00000470837 LIPT2A6NK58 231 aa8.79□□□□□ -1
CCM2-204ENST00000470837 MCIDASD6RGH6 385 aa8.79□□□□□ -1
CCM2-204ENST00000470837 LRRN3E7EW58 273 aa8.79□□□□□ -1
CCM2-204ENST00000470837 M0R082 166 aa8.79□□□□□ -1
CCM2-204ENST00000470837 XKRYO14609 159 aa8.79□□□□□ -1
CCM2-204ENST00000470837 DNPH1O43598 174 aa8.79□□□□□ -1
CCM2-204ENST00000470837 IDH3BO43837 385 aa8.79□□□□□ -1
CCM2-204ENST00000470837 PTP4A3O75365 173 aa8.79□□□□□ -1
CCM2-204ENST00000470837 SYNGR4O95473 234 aa8.79□□□□□ -1
CCM2-204ENST00000470837 PMS2P2O95744 297 aa8.79□□□□□ -1
CCM2-204ENST00000470837 GNAO1P09471 354 aa8.79□□□□□ -1
CCM2-204ENST00000470837 ZNF3P17036 446 aa8.79□□□□□ -1
CCM2-204ENST00000470837 IL11P20809 199 aa8.79□□□□□ -1
CCM2-204ENST00000470837 GRK5P34947 590 aa8.79□□□□□ -1
CCM2-204ENST00000470837 AQP2P41181 271 aa8.79□□□□□ -1
CCM2-204ENST00000470837 PCYT1AP49585 367 aa8.79□□□□□ -1
CCM2-204ENST00000470837 DIO1P49895 249 aa8.79□□□□□ -1
CCM2-204ENST00000470837 CARD18P57730 90 aa8.79□□□□□ -1
CCM2-204ENST00000470837 CDK5Q00535 292 aa8.79□□□□□ -1
CCM2-204ENST00000470837 PUDPQ08623 228 aa8.79□□□□□ -1
CCM2-204ENST00000470837 TOP3AQ13472 1001 aaPredicted RBP8.79□□□□□ -1
CCM2-204ENST00000470837 C1DQ13901 141 aaKnown RBP8.79□□□□□ -1
CCM2-204ENST00000470837 PGGHGQ32M88 737 aa8.79□□□□□ -1
CCM2-204ENST00000470837 TMEM236Q5W0B7 351 aa8.79□□□□□ -1
CCM2-204ENST00000470837 HBMQ6B0K9 141 aa8.79□□□□□ -1
CCM2-204ENST00000470837 TMEM225Q6GV28 225 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms