RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 RBBP4Q09028 425 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 OR7A5Q15622 319 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 GLIPR1L2Q4G1C9 344 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 CGB2Q6NT52 195 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 NET1Q7Z628 596 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-208ENST00000470045 P2RY8Q86VZ1 359 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 TMEM99Q8N816 258 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 ZNF611Q8N823 705 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 ZIC4Q8N9L1 334 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 WFDC11Q8NEX6 87 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 LILRB1Q8NHL6 650 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-208ENST00000470045 CCL19Q99731 98 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 PTDSS2Q9BVG9 487 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 ASB6Q9NWX5 421 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 TESQ9UGI8 421 aaKnown RBP12.4□□□□□ -0.42
COMMD3-208ENST00000470045 RNF115Q9Y4L5 304 aa12.4□□□□□ -0.42
COMMD3-208ENST00000470045 CADP27708 2225 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 PRORSD1PA6NEY8 169 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 TMCC2O75069 709 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 MFN2O95140 757 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 ITGA5P08648 1049 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 MTPNP58546 118 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 NKX6-1P78426 367 aaPredicted RBP12.39□□□□□ -0.43
COMMD3-208ENST00000470045 SELPLGQ14242 412 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 PPA1Q15181 289 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 SHEQ5VZ18 495 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 CASP12Q6UXS9 341 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 C11orf65Q8NCR3 313 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 BHLHE22Q8NFJ8 381 aaPredicted RBP12.39□□□□□ -0.43
COMMD3-208ENST00000470045 OR9K2Q8NGE7 335 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 MFSD8Q8NHS3 518 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 ZNF607Q96SK3 696 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 TAPBPLQ9BX59 468 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 CCDC134Q9H6E4 229 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 ESRP2Q9H6T0 727 aaKnown RBP12.39□□□□□ -0.43
COMMD3-208ENST00000470045 KAT8Q9H7Z6 458 aaKnown RBP12.39□□□□□ -0.43
COMMD3-208ENST00000470045 EVA1AQ9H8M9 152 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 SLC7A10Q9NS82 523 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 MRGBPQ9NV56 204 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 FGFR1OP2Q9NVK5 253 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 PARPBPQ9NWS1 579 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 TAS2R16Q9NYV7 291 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 ANGPT4Q9Y264 503 aa12.39□□□□□ -0.43
COMMD3-208ENST00000470045 IGKV1D-42A0A075B6H8 117 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 A0A1B0GWA3 101 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 DPRXA6NFQ7 191 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 FBP2O00757 339 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 SMPD2O60906 423 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 SERPINB7O75635 380 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 RAD51DO75771 328 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 VAMP5O95183 116 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 AHSA1O95433 338 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 TROVE2P10155 538 aaKnown RBP eCLIP12.38□□□□□ -0.43
COMMD3-208ENST00000470045 PAX1P15863 534 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 AQP1P29972 269 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 FOXG1P55316 489 aaPredicted RBP12.38□□□□□ -0.43
COMMD3-208ENST00000470045 DMTNQ08495 405 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 FAPQ12884 760 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 NFYCQ13952 458 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 STK11Q15831 433 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 TSPO2Q5TGU0 170 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 FAM91A1Q658Y4 838 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 C5orf46Q6UWT4 87 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 C1orf162Q8NEQ5 155 aaPredicted RBP12.38□□□□□ -0.43
COMMD3-208ENST00000470045 OR52E4Q8NGH9 312 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 DNAJA4Q8WW22 397 aaPredicted RBP12.38□□□□□ -0.43
COMMD3-208ENST00000470045 MUS81Q96NY9 551 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 ZNF385AQ96PM9 386 aaKnown RBP12.38□□□□□ -0.43
COMMD3-208ENST00000470045 GSX2Q9BZM3 304 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 TRIM2Q9C040 744 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 ADPRHL2Q9NX46 363 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 NPAP1Q9NZP6 1156 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 C2CD3Q4AC94 2353 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 NF1P21359 2839 aa12.38□□□□□ -0.43
COMMD3-208ENST00000470045 ELOA3DA6NLF2 546 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-208ENST00000470045 FXYD1O00168 92 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 TPST2O60704 377 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 CD3EP07766 207 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 PNMTP11086 282 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 FOSL1P15407 271 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 GZMMP51124 257 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 RIPPLY3P57055 190 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 RGS8P57771 180 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-208ENST00000470045 BSPH1Q075Z2 132 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 CAPRIN1Q14444 709 aaKnown RBP12.37□□□□□ -0.43
COMMD3-208ENST00000470045 GABRA6Q16445 453 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 CYP51A1Q16850 503 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 TRMT5Q32P41 509 aaKnown RBP12.37□□□□□ -0.43
COMMD3-208ENST00000470045 ELOA3BQ3SY89 546 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 COQ5Q5HYK3 327 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 Q5PR19 223 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 C1QTNF12Q5T7M4 302 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 ALKBH2Q6NS38 261 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 ULK3Q6PHR2 472 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 PRSS57Q6UWY2 283 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 ARMC8Q8IUR7 673 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 SLC30A8Q8IWU4 369 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 C17orf78Q8N4C9 275 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms