RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TEX261Q6UWH6 196 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 ESPNLQ6ZVH7 1005 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 CMTM4Q8IZR5 234 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-209ENST00000470026 RCBTB1Q8NDN9 531 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 OR51L1Q8NGJ5 315 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 MRGPRX1Q96LB2 322 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 SORCS2Q96PQ0 1159 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 CCNL2Q96S94 520 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-209ENST00000470026 PDCD1LG2Q9BQ51 273 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 ORAI3Q9BRQ5 295 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 TTTY10Q9BZA0 68 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 SLC19A3Q9BZV2 496 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 TEKT2Q9UIF3 430 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 GNG8Q9UK08 70 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF222Q9UK12 451 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 DTX4Q9Y2E6 619 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 ADAM18Q9Y3Q7 739 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 U3KQ87 197 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 LEUTXA8MZ59 168 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 AIPO00170 330 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 ITGA10O75578 1167 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 OR7A10O76100 309 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 EGFP01133 1207 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 RAF1P04049 648 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 COL28A1Q2UY09 1125 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 EID2Q8N6I1 236 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 RPLP0P6Q8NHW5 317 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 GIMAP1Q8WWP7 306 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 LIPHQ8WWY8 451 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 SLC25A38Q96DW6 304 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 MED30Q96HR3 178 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 NMNAT3Q96T66 252 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 CERS4Q9HA82 394 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 NOX4Q9NPH5 578 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 NANSQ9NR45 359 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 RPS6KB2Q9UBS0 482 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 CLEC4AQ9UMR7 237 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF337Q9Y3M9 751 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 CLDN16Q9Y5I7 305 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 KIR2DS5A0A0G2JLQ3 304 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 A0A0G2JNG1 304 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 IFITM5A6NNB3 132 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 KIR2DS3K7RE56 304 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 PDCD5O14737 125 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 SELENOFO60613 162 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 NOS1APO75052 506 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-209ENST00000470026 SLC22A5O76082 557 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 ADRB1P08588 477 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 EPHA4P54764 986 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 KIR2DS5Q14953 304 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 PRTGQ2VWP7 1150 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 ELFN2Q5R3F8 820 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 PRSS45Q7RTY3 260 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 EXD3Q8N9H8 876 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 OR9A4Q8NGU2 314 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 ZPLD1Q8TCW7 415 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 RGP1Q92546 391 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-209ENST00000470026 LCORQ96JN0 433 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-209ENST00000470026 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 G6PC3Q9BUM1 346 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 AUNIPQ9H7T9 357 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 FAM60AQ9NP50 221 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 DLL4Q9NR61 685 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 STARD5Q9NSY2 213 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 MRPS7Q9Y2R9 242 aaKnown RBP12.49□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF281Q9Y2X9 895 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 HS3ST3A1Q9Y663 406 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 IGKV1D-42A0A075B6H8 117 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 OR5K3A6NET4 321 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 SERINC4A6NH21 518 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 OR5K4A6NMS3 321 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 G3V3Q6 166 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 HRKO00198 91 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 SULT1B1O43704 296 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 CTNSO60931 367 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 GLCEO94923 617 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 TGM6O95932 706 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 MT-ND4P03905 459 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 CT45A8P0DMV1 189 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 CT45A9P0DMV2 189 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 CTHP32929 405 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 MNDAP41218 407 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 GPR3P46089 330 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 CCR9P51686 369 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 SLC25A1P53007 311 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 PPP1CAP62136 330 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 CT45A2Q5DJT8 189 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 RNASE12Q5GAN4 147 aaKnown RBP12.49□□□□□ -0.41
BRCA1-209ENST00000470026 LUZP2Q86TE4 346 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 SLC35F3Q8IY50 421 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 TIGD4Q8IY51 512 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 LRRC75AQ8NAA5 344 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 FAM71CQ8NEG0 241 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF680Q8NEM1 530 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF671Q8TAW3 534 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 RIT1Q92963 219 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 C3orf49Q96BT1 292 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 RADILQ96JH8 1075 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms