RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 NRF1Q16656 503 aa21.44■■□□□ 1.02
PTCH1-210ENST00000468211 CROCCP2Q86T23 111 aa21.44■■□□□ 1.02
PTCH1-210ENST00000468211 MUC15Q8N387 334 aa21.44■■□□□ 1.02
PTCH1-210ENST00000468211 SDR39U1Q9NRG7 319 aaPredicted RBP21.44■■□□□ 1.02
PTCH1-210ENST00000468211 AQP7P3A6NL99 342 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 CD5LO43866 347 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 GPIP06744 558 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 ZCCHC18P0CG32 403 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 FABP6P51161 128 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 NUDT6P53370 316 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 LGALS3BPQ08380 585 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 LIN52Q52LA3 116 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 WBP2NLQ6ICG8 309 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 FBXL14Q8N1E6 418 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 C1orf162Q8NEQ5 155 aaPredicted RBP21.43■■□□□ 1.02
PTCH1-210ENST00000468211 TMEM19Q96HH6 336 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 MANSC1Q9H8J5 431 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 YAE1D1Q9NRH1 226 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 ZIM2Q9NZV7 527 aa21.43■■□□□ 1.02
PTCH1-210ENST00000468211 SLCO1B7G3V0H7 640 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 ANP32DO95626 131 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 NUDT7P0C024 238 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 CDH2P19022 906 aaPredicted RBP21.42■■□□□ 1.02
PTCH1-210ENST00000468211 MPGP29372 298 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 CRISP3P54108 245 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 MAGOHP61326 146 aaKnown RBP21.42■■□□□ 1.02
PTCH1-210ENST00000468211 HIKESHIQ53FT3 197 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 RNF220Q5VTB9 566 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 ATG16L1Q676U5 607 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 AAED1Q7RTV5 226 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 SERPINA11Q86U17 422 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 GPAT4Q86UL3 456 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 C17orf78Q8N4C9 275 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 OR10H5Q8NGA6 315 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 ADAD1Q96M93 576 aaKnown RBP21.42■■□□□ 1.02
PTCH1-210ENST00000468211 RHNO1Q9BSD3 238 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 SF3B5Q9BWJ5 86 aaKnown RBP21.42■■□□□ 1.02
PTCH1-210ENST00000468211 RSPO3Q9BXY4 272 aaPredicted RBP21.42■■□□□ 1.02
PTCH1-210ENST00000468211 MXRA5Q9NR99 2828 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 ADPRHL2Q9NX46 363 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 AMDHD2Q9Y303 409 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 ATP23Q9Y6H3 246 aa21.42■■□□□ 1.02
PTCH1-210ENST00000468211 FAM234BA2RU67 622 aa21.41■■□□□ 1.02
PTCH1-210ENST00000468211 FRS3O43559 492 aa21.41■■□□□ 1.02
PTCH1-210ENST00000468211 TP53P04637 393 aaPredicted RBP21.41■■□□□ 1.02
PTCH1-210ENST00000468211 POLR2JP52435 117 aaKnown RBP21.41■■□□□ 1.02
PTCH1-210ENST00000468211 SLC18A1P54219 525 aa21.41■■□□□ 1.02
PTCH1-210ENST00000468211 C3orf49Q96BT1 292 aa21.41■■□□□ 1.02
PTCH1-210ENST00000468211 ITCHQ96J02 903 aa21.41■■□□□ 1.02
PTCH1-210ENST00000468211 CALML5Q9NZT1 146 aa21.41■■□□□ 1.02
PTCH1-210ENST00000468211 A8MVM7 634 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 ATP6V1G2-DDX39BF2Z307 99 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 KLF11O14901 512 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 NPIPB7O75200 414 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 HOXC5Q00444 222 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 TGFBR3Q03167 851 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 C1orf140Q5VVS0 124 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 DEPDC4Q8N2C3 294 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 ZNF525Q8N782 197 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 TLCD1Q96CP7 247 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 SPATA9Q9BWV2 254 aa21.4■■□□□ 1.02
PTCH1-210ENST00000468211 PAIP1Q9H074 479 aaKnown RBP21.4■■□□□ 1.02
PTCH1-210ENST00000468211 TMEM229AB2RXF0 380 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 UBDO15205 165 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 TLX2O43763 284 aaPredicted RBP21.39■■□□□ 1.01
PTCH1-210ENST00000468211 SELENOPP49908 381 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 COPZ1P61923 177 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 LARS2Q15031 903 aaKnown RBP21.39■■□□□ 1.01
PTCH1-210ENST00000468211 RAB35Q15286 201 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 C6orf10Q5SRN2 563 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 TMEM225Q6GV28 225 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 ZNF544Q6NX49 715 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 SLC2A7Q6PXP3 512 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 MSANTD1Q6ZTZ1 278 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 CREB3L2Q70SY1 520 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 LINGO2Q7L985 606 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 EPHX4Q8IUS5 362 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 POMGNT2Q8NAT1 580 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 GTF2H4Q92759 462 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 MAL2Q969L2 176 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 RMND5AQ9H871 391 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 MOKQ9UQ07 419 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 PCDHB14Q9Y5E9 798 aa21.39■■□□□ 1.01
PTCH1-210ENST00000468211 A0A0G2JPF8 293 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 HNRNPCL2B2RXH8 293 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 HNRNPCL3B7ZW38 293 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 H7C417 338 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 HNRNPCL1O60812 293 aaKnown RBP21.38■■□□□ 1.01
PTCH1-210ENST00000468211 LY6HO94772 140 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 LGI1O95970 557 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 HNRNPCL4P0DMR1 293 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 HOXB9P17482 250 aaPredicted RBP21.38■■□□□ 1.01
PTCH1-210ENST00000468211 NCF2P19878 526 aaPredicted RBP21.38■■□□□ 1.01
PTCH1-210ENST00000468211 PRPS1P60891 318 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 RGNQ15493 299 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 CLEC2AQ6UVW9 174 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 CXXC5Q7LFL8 322 aaKnown RBP21.38■■□□□ 1.01
PTCH1-210ENST00000468211 NANOS1Q8WY41 292 aaKnown RBP21.38■■□□□ 1.01
PTCH1-210ENST00000468211 TAPBPLQ9BX59 468 aa21.38■■□□□ 1.01
PTCH1-210ENST00000468211 FKRPQ9H9S5 495 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms