RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	RBMS1	P29558	406 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	TGFBR2	P37173	567 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	APOBEC1	P41238	236 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	ERVK-25	P63136	954 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	RPL18	Q07020	188 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	ITGAD	Q13349	1161 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	MED22	Q15528	200 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	ALG10	Q5BKT4	473 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	C1orf140	Q5VVS0	124 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	C1QL3	Q5VWW1	255 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	RNLS	Q5VYX0	342 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	H3F3C	Q6NXT2	135 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	SLC16A12	Q6ZSM3	486 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	HIST3H2A	Q7L7L0	130 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	SHF	Q7M4L6	423 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	ANKRD13B	Q86YJ7	626 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	ALDH16A1	Q8IZ83	802 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	IL22RA1	Q8N6P7	574 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	FADS6	Q8N9I5	356 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	LRRC75A	Q8NAA5	344 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	FAM98A	Q8NCA5	519 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	SLC37A3	Q8NCC5	494 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	SDR9C7	Q8NEX9	313 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	OR52E2	Q8NGJ4	325 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	OR4K13	Q8NH42	304 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	ADAMTS17	Q8TE56	1095 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	PAQR8	Q8TEZ7	354 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	HIST1H2AC	Q93077	130 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	NKD1	Q969G9	470 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	DNAJA3	Q96EY1	480 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	MRGPRX4	Q96LA9	322 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	NPAS1	Q99742	590 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	HCAR1	Q9BXC0	346 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	SH2D2A	Q9NP31	389 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	NRIP3	Q9NQ35	241 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	WDR70	Q9NW82	654 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	FBXL2	Q9UKC9	423 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	ERGIC3	Q9Y282	383 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	ADAM18	Q9Y3Q7	739 aa		11.14	□□□□□ -0.63
HDLBP-231	ENST00000467435	TEX13C	A0A0J9YWL9	993 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	CCDC182	A6NF36	153 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	SLC22A31	A6NKX4	558 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	CDRT15L2	A8MXV6	281 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	SHISA8	B8ZZ34	492 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435		M0R082	166 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	ETV2	O00321	342 aa	Predicted RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	SNPH	O15079	494 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	ARPC3	O15145	178 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	GABARAP	O95166	117 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	CD14	P08571	375 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	HIST1H1C	P16403	213 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	SLC2A5	P22732	501 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	NOVA1	P51513	510 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	CTXN1	P60606	82 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	RPS7	P62081	194 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	INPP5J	Q15735	1006 aa	Predicted RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	KLHL12	Q53G59	568 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	SLC25A53	Q5H9E4	307 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	ARMC4	Q5T2S8	1044 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	FAM69A	Q5T7M9	428 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	MEPCE	Q7L2J0	689 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	P2RY8	Q86VZ1	359 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	WDSUB1	Q8N9V3	476 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	CYB561A3	Q8NBI2	242 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	LSM14A	Q8ND56	463 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	OR4F15	Q8NGB8	312 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	KISS1R	Q969F8	398 aa	Predicted RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	SLC25A36	Q96CQ1	311 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	RASD2	Q96D21	266 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	C1GALT1C1	Q96EU7	318 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	THOC3	Q96J01	351 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	FRMD6	Q96NE9	622 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	OR5M11	Q96RB7	305 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	ANGPTL4	Q9BY76	406 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	OR11A1	Q9GZK7	315 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	PTGES2	Q9H7Z7	377 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	IL17B	Q9UHF5	180 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	CLEC2D	Q9UHP7	191 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	EXOG	Q9Y2C4	368 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	LSM2	Q9Y333	95 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	FRYL	O94915	3013 aa		11.13	□□□□□ -0.63
HDLBP-231	ENST00000467435	CACNA1H	O95180	2353 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	ZNF208	O43345	1280 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	IDH3B	O43837	385 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	SERPINI2	O75830	405 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	ATE1	O95260	518 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	TSPAN19	P0C672	248 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	HSMCR30	P0CW71	290 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	CEACAM1	P13688	526 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	APEH	P13798	732 aa	Known RBP	11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	CD36	P16671	472 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	NR4A1	P22736	598 aa		11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	TCEA1	P23193	301 aa	Known RBP	11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	GTF2E2	P29084	291 aa	Known RBP	11.12	□□□□□ -0.63
HDLBP-231	ENST00000467435	PCSK6	P29122	969 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms