RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, human

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSSC4-208	ENST00000467308	NGB	Q9NPG2	151 aa		13.98	□□□□□ -0.17
TSSC4-208	ENST00000467308	RPS6KA6	Q9UK32	745 aa		13.98	□□□□□ -0.17
TSSC4-208	ENST00000467308	SAMD4A	Q9UPU9	718 aa	Known RBP	13.98	□□□□□ -0.17
TSSC4-208	ENST00000467308	VDAC3	Q9Y277	283 aa		13.98	□□□□□ -0.17
TSSC4-208	ENST00000467308	GPC6	Q9Y625	555 aa	Predicted RBP	13.98	□□□□□ -0.17
TSSC4-208	ENST00000467308	NBEAL1	Q6ZS30	2694 aa		13.98	□□□□□ -0.17
TSSC4-208	ENST00000467308	CXCL13	O43927	109 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	FKBP6	O75344	327 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	ENTPD5	O75356	428 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	STX11	O75558	287 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	KCNK2	O95069	426 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	H6PD	O95479	791 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	CD3E	P07766	207 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	PSMA4	P25789	261 aa	Known RBP	13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	AGTR1	P30556	359 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	RFX3	P48380	749 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	CRYBA2	P53672	197 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	NCMAP	Q5T1S8	102 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	CYP2R1	Q6VVX0	501 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	CBLL1	Q75N03	491 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	EIF3M	Q7L2H7	374 aa	Known RBP	13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	GALNT10	Q86SR1	603 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	OR2V1	Q8NHB1	315 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	RASSF5	Q8WWW0	418 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	FAM162A	Q96A26	154 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	ZBTB8A	Q96BR9	441 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	SPATA5L1	Q9BVQ7	753 aa		13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	ESRP2	Q9H6T0	727 aa	Known RBP	13.97	□□□□□ -0.17
TSSC4-208	ENST00000467308	GXYLT2	A0PJZ3	443 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	ALG1L2	C9J202	215 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	GMFG	O60234	142 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	KIAA0513	O60268	411 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	SERPINB7	O75635	380 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	MFN2	O95140	757 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	SERPINA1	P01009	418 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	NGFR	P08138	427 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	PABPC4L	P0CB38	370 aa	Known RBP	13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	ACVR1B	P36896	505 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	HPCA	P84074	193 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	GRAMD1B	Q3KR37	738 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	CHRFAM7A	Q494W8	412 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	ZNF672	Q499Z4	452 aa	Predicted RBP	13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	GPAT3	Q53EU6	434 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	PDSS1	Q5T2R2	415 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	FRRS1	Q6ZNA5	592 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	SPATA24	Q86W54	205 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	GABRG1	Q8N1C3	465 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	PAPD5	Q8NDF8	572 aa	Known RBP	13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	HSD17B8	Q92506	261 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	PIK3R3	Q92569	461 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	OTUB1	Q96FW1	271 aa	Predicted RBP	13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	USB1	Q9BQ65	265 aa	Known RBP	13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	MAGIX	Q9H6Y5	334 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	C12orf49	Q9H741	205 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	YAE1D1	Q9NRH1	226 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	ARMC1	Q9NVT9	282 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	ADPRHL2	Q9NX46	363 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	WDR45	Q9Y484	360 aa		13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.96	□□□□□ -0.17
TSSC4-208	ENST00000467308	DHRS12	A0PJE2	317 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	TMEM229A	B2RXF0	380 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308		M0QX08	132 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	TNFSF11	O14788	317 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	CLOCK	O15516	846 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	NDUFB5	O43674	189 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	IGKV1D-16	P01601	117 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	IGHV4-39	P01824	125 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	FES	P07332	822 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	RPS4Y1	P22090	263 aa	Known RBP	13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	ADH6	P28332	368 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	SLC7A1	P30825	629 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	CDKN1A	P38936	164 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	SELENOW	P63302	87 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	RNPS1	Q15287	305 aa	Known RBP	13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	PLPPR5	Q32ZL2	321 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	CYBRD1	Q53TN4	286 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	SFRP5	Q5T4F7	317 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	HBM	Q6B0K9	141 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	TYW3	Q6IPR3	259 aa	Known RBP	13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	FIGNL1	Q6PIW4	674 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	TFAP2E	Q6VUC0	442 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	ADGRG5	Q8IZF4	528 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	ZNF619	Q8N2I2	560 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	STMN2	Q93045	179 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	TAMM41	Q96BW9	452 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	PYURF	Q96I23	114 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	RSRC1	Q96IZ7	334 aa	Known RBP	13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	GRIP2	Q9C0E4	1043 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	BARX1	Q9HBU1	254 aa	Predicted RBP	13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	GP6	Q9HCN6	339 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	MED17	Q9NVC6	651 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	FBXO34	Q9NWN3	711 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308	IFT52	Q9Y366	437 aa		13.95	□□□□□ -0.18
TSSC4-208	ENST00000467308		A0A0J9YW62	118 aa		13.94	□□□□□ -0.18
TSSC4-208	ENST00000467308	AGAP5	A6NIR3	686 aa		13.94	□□□□□ -0.18
TSSC4-208	ENST00000467308		A8MV72	311 aa	Predicted RBP	13.94	□□□□□ -0.18
TSSC4-208	ENST00000467308	NPIPB9	F8W1W9	429 aa		13.94	□□□□□ -0.18
TSSC4-208	ENST00000467308	FCMR	O60667	390 aa		13.94	□□□□□ -0.18
TSSC4-208	ENST00000467308	ADAM11	O75078	769 aa		13.94	□□□□□ -0.18
TSSC4-208	ENST00000467308	CD247	P20963	164 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms