RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ZNF607Q96SK3 696 aa16.66■□□□□ 0.26
SNAPC3-205ENST00000467062 MRPS30Q9NP92 439 aaKnown RBP16.66■□□□□ 0.26
SNAPC3-205ENST00000467062 PRMT8Q9NR22 394 aaPredicted RBP16.66■□□□□ 0.26
SNAPC3-205ENST00000467062 KIAA1549LQ6ZVL6 1849 aa16.66■□□□□ 0.26
SNAPC3-205ENST00000467062 EML2O95834 649 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 CEACAM5P06731 702 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 MMP11P24347 488 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 STAT5AP42229 794 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 FRKP42685 505 aaPredicted RBP16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SLC9A5Q14940 896 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SMARCD3Q6STE5 483 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 ACOT4Q8N9L9 421 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 POGLUT1Q8NBL1 392 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 TMEM106CQ9BVX2 250 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 UCK1Q9HA47 277 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SEBOXQ9HB31 216 aaPredicted RBP16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 P2RX2Q9UBL9 471 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 GPR52Q9Y2T5 361 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 COL4A3Q01955 1670 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 A0A1W2PQU0 124 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 MAN2B1O00754 1011 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 IL5P05113 134 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SHC1P29353 583 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 E2F1Q01094 437 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SGCGQ13326 291 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SMCO1Q147U7 214 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 KLBQ86Z14 1044 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 TBC1D19Q8N5T2 526 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 OR4E2Q8NGC2 313 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SUN3Q8TAQ9 357 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 RXFP4Q8TDU9 374 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SMIM4Q8WVI0 70 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 THAP4Q8WY91 577 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 ZDHHC12Q96GR4 267 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 HRASLSQ9HDD0 168 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 OPN4Q9UHM6 478 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 FBXL3Q9UKT7 428 aa16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 SNRNP200O75643 2136 aaKnown RBP16.65■□□□□ 0.26
SNAPC3-205ENST00000467062 ZNF729A6NN14 1252 aaPredicted RBP16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 C2orf74A8MZ97 194 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 C5orf67F2Z3F1 127 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 UBE2CO00762 179 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 DVL2O14641 736 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 TO15178 435 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 GP1BAP07359 652 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 MPGP29372 298 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 PBX2P40425 430 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 CLDN2P57739 230 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 AP3S2P59780 193 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 SGCAQ16586 387 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 ZNF791Q3KP31 576 aaPredicted RBP16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 TMEM31Q5JXX7 168 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 MANEAQ5SRI9 462 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 NHLRC1Q6VVB1 395 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 OR4K5Q8NGD3 323 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 FGF14Q92915 247 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 RFKQ969G6 155 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 COL26A1Q96A83 441 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 MS4A6EQ96DS6 147 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 FNDC11Q9BVV2 318 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 NOX3Q9HBY0 568 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 NTNG1Q9Y2I2 539 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 GPR55Q9Y2T6 319 aaPredicted RBP16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 KDM4EB2RXH2 506 aaPredicted RBP16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 H0Y8X5 98 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 AK4P27144 223 aaPredicted RBP16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 PEBP1P30086 187 aaKnown RBP16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 GDI1P31150 447 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 BDH1Q02338 343 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 MELKQ14680 651 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 GUCA2BQ16661 112 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 C9orf50Q5SZB4 431 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 BEND4Q6ZU67 534 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 FAM122BQ7Z309 247 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 MS4A4EQ96PG1 132 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 GAL3ST1Q99999 423 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 PLA2G12AQ9BZM1 189 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 MFFQ9GZY8 342 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 PCBD2Q9H0N5 130 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 SLC38A1Q9H2H9 487 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 EGLN3Q9H6Z9 239 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 IL20RAQ9UHF4 553 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 ENTPD4Q9Y227 616 aa16.64■□□□□ 0.25
SNAPC3-205ENST00000467062 AIFM1O95831 613 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 RPA2P15927 270 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 MGMTP16455 207 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 HIST1H1TP22492 207 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 FNTBP49356 437 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 OR10A3P58181 314 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 CLEC12AQ5QGZ9 265 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 CDC73Q6P1J9 531 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 PARM1Q6UWI2 310 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 OR9A2Q8NGT5 310 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 WDR89Q96FK6 387 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 PRDM7Q9NQW5 492 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 MAN2C1Q9NTJ4 1040 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 CLEC4AQ9UMR7 237 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3DA0A087WVF3 549 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3IA0A087WXS9 549 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3EA0A087X179 549 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms