RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 AKR7A3O95154 331 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 THY1P04216 161 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 COX6B1P14854 86 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 MSX2P35548 267 aaPredicted RBP12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 TAS2R41P59536 307 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 ABLIM2Q6H8Q1 611 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 LINC00114Q6XXX2 140 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 FKBP9P1Q75LS8 142 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 P3H2Q8IVL5 708 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 ARHGAP24Q8N264 748 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 TMEM99Q8N816 258 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF610Q8N9Z0 462 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 ACBD4Q8NC06 268 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 PIGXQ8TBF5 258 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 TAAR8Q969N4 342 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF775Q96BV0 537 aaPredicted RBP12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 SLC25A36Q96CQ1 311 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 EPYCQ99645 322 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 TMEM43Q9BTV4 400 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 PTDSS2Q9BVG9 487 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 DCAF13Q9NV06 445 aaKnown RBP12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 TAS2R1Q9NYW7 299 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 MAGEL2Q9UJ55 1249 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 SLC7A7Q9UM01 511 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 CELSR2Q9HCU4 2923 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 IGKV3D-15A0A087WSY6 115 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 FTCDNL1E5RQL4 147 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 RAMP1O60894 148 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 OR5F1O95221 314 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 LYPD3O95274 346 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 IFNW1P05000 195 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 IGFBP2P18065 325 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 PIN1Q13526 163 aaPredicted RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 IFI44LQ53G44 452 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 OTUD3Q5T2D3 398 aaPredicted RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 FAM69AQ5T7M9 428 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF787Q6DD87 383 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF474Q6S9Z5 364 aaPredicted RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 MEX3BQ6ZN04 569 aaKnown RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 NUFIP2Q7Z417 695 aaKnown RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 GDF7Q7Z4P5 450 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 DMRTC2Q8IXT2 367 aaPredicted RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 GEMIN6Q8WXD5 167 aaKnown RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 SLC41A3Q96GZ6 507 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 MPP4Q96JB8 637 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 HSH2DQ96JZ2 352 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF300Q96RE9 604 aaPredicted RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 AMBRA1Q9C0C7 1298 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 C12orf49Q9H741 205 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 GALNT8Q9NY28 637 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 RIMS3Q9UJD0 308 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 SAMD4AQ9UPU9 718 aaKnown RBP12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 PKDREJQ9NTG1 2253 aa12.91□□□□□ -0.34
SQSTM1-205ENST00000464493 AQP7P3A6NL99 342 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 GPR171O14626 319 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 HNRNPRO43390 633 aaKnown RBP12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 GTF2E2P29084 291 aaKnown RBP12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 PEX19P40855 299 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 SLC16A1P53985 500 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 TMEM225Q6GV28 225 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 TTC33Q6PID6 262 aaPredicted RBP12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 WDR88Q6ZMY6 472 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 GALNT5Q7Z7M9 940 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 STK32CQ86UX6 486 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 KIF18BQ86Y91 864 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 OR6S1Q8NH40 331 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 PRSS27Q9BQR3 290 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 ELOVL5Q9NYP7 299 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 PRPF19Q9UMS4 504 aaKnown RBP12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 A4GNTQ9UNA3 340 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
SQSTM1-205ENST00000464493 ARPC2O15144 300 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 VAMP5O95183 116 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 THRBP10828 461 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 PTNP21246 168 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 CBLP22681 906 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 IFNA8P32881 189 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 CD79BP40259 229 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 YAP1P46937 504 aaKnown RBP12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 PCYT1AP49585 367 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 P2RY4P51582 365 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 FAM27E3Q08E93 113 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 ST3GAL3Q11203 375 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 SNTB1Q13884 538 aaKnown RBP12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 SLC17A1Q14916 467 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 MFSD13AQ14CX5 517 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 BEND4Q6ZU67 534 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 GPAT4Q86UL3 456 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 C10orf53Q8N6V4 93 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 PRRC1Q96M27 445 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 NSMCE2Q96MF7 247 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF426Q9BUY5 554 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 SF3B5Q9BWJ5 86 aaKnown RBP12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 SLC19A3Q9BZV2 496 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 C6orf203Q9P0P8 240 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms