RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 SULT1A4P0DMN0 295 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 ICAM2P13598 275 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 CPMP14384 443 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 PSMB1P20618 241 aaKnown RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 TNFRSF4P43489 277 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 HSD17B12Q53GQ0 312 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 FAM74A1Q5RGS3 127 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 RANBP3LQ86VV4 465 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 C10orf53Q8N6V4 93 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 TTLQ8NG68 377 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 KISS1RQ969F8 398 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 MNTQ99583 582 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 ARHGDIGQ99819 225 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 RAB11FIP5Q9BXF6 653 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 ADGRL4Q9HBW9 690 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 PHPT1Q9NRX4 125 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 STARD5Q9NSY2 213 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 TAS2R10Q9NYW0 307 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 TEX51A0A1B0GUA7 166 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 A0A1W2PQF6 199 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 H0YC42 278 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 DOK2O60496 412 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 APODP05090 189 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF3P17036 446 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 AK4P27144 223 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 CCR9P51686 369 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 ADPRHP54922 357 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 CLLU1Q5K131 121 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 TMEM69Q5SWH9 247 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 FGD2Q7Z6J4 655 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 SLC51BQ86UW2 128 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 LSM14AQ8ND56 463 aaKnown RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 OR2L3Q8NG85 312 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 FLVCR1-AS1Q8TAF5 88 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 ZNRF4Q8WWF5 429 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 CNOT9Q92600 299 aaKnown RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 PELI1Q96FA3 418 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 PGLYRP3Q96LB9 341 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 NMNAT3Q96T66 252 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 CERS4Q9HA82 394 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 LIN7BQ9HAP6 207 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 IER3IP1Q9Y5U9 82 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 TDRD6O60522 2096 aaKnown RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 TRAPPC13A5PLN9 417 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 SLC22A31A6NKX4 558 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 APEHP13798 732 aaKnown RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 PPM1FP49593 454 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 AKR1D1P51857 326 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 AKR1C2P52895 323 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 AKR1C1Q04828 323 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 ITPRIPL2Q3MIP1 535 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF776Q68DI1 518 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 PRSS41Q7RTY9 318 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 KCTD20Q7Z5Y7 419 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 RAB42Q8N4Z0 105 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 GATSQ8NAP1 163 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF511Q8NB15 262 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 SYNPRQ8TBG9 265 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 PBX4Q9BYU1 374 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 ULBP3Q9BZM4 244 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 KIR3DX1Q9H7L2 352 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 MEPEQ9NQ76 525 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 NTMQ9P121 344 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 MED31Q9Y3C7 131 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 PCDHGA5Q9Y5G8 931 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 URB1O60287 2271 aaKnown RBP11.43□□□□□ -0.58
HDAC4-208ENST00000463007 SPAG17Q6Q759 2223 aa11.43□□□□□ -0.58
HDAC4-208ENST00000463007 GXYLT2A0PJZ3 443 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 BHLHE40O14503 412 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 PLPP2O43688 288 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 HOXC4P09017 264 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 HIST1H1CP16403 213 aaKnown RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 GABRA3P34903 492 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 PITPNAQ00169 270 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 PLA2G7Q13093 441 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 RIN1Q13671 783 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 C2orf68Q2NKX9 166 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 TMEM196Q5HYL7 178 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 MFSD12Q6NUT3 480 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 POMZP3Q6PJE2 187 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 NDUFAF7Q7L592 441 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 OR2L5Q8NG80 312 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 OR5T3Q8NGG3 340 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 HSPA12BQ96MM6 686 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 SDF2Q99470 211 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 PRSS27Q9BQR3 290 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 MED12Q93074 2177 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ANXA2P2A6NMY6 339 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 NFYAP23511 347 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF136P52737 540 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ELP2Q6IA86 826 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 MRGPREQ86SM8 312 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 SLITRK4Q8IW52 837 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 SFXN5Q8TD22 340 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 TNFAIP8L1Q8WVP5 186 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF681Q96N22 645 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 UBL7Q96S82 380 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 SLC17A9Q9BYT1 436 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 B3GNT4Q9C0J1 378 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms