RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ATP6V1C1P21283 382 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 ZFP36P26651 326 aaKnown RBP6.61□□□□□ -1.35
SMC3-202ENST00000462899 GPR6P46095 362 aaPredicted RBP6.61□□□□□ -1.35
SMC3-202ENST00000462899 EVX1P49640 407 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 CCR4P51679 360 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 PRKAA2P54646 552 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 MRPS11P82912 194 aaKnown RBP6.61□□□□□ -1.35
SMC3-202ENST00000462899 CAV1Q03135 178 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 UAP1Q16222 522 aaPredicted RBP6.61□□□□□ -1.35
SMC3-202ENST00000462899 MAPK14Q16539 360 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 FAHD2BQ6P2I3 314 aaPredicted RBP6.61□□□□□ -1.35
SMC3-202ENST00000462899 EMBQ6PCB8 327 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 PAQR6Q6TCH4 344 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 KLHL24Q6TFL4 600 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 Q6ZS46 218 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 RNF165Q6ZSG1 346 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 SPATA21Q7Z572 469 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 POMGNT2Q8NAT1 580 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 DCAKDQ8WVC6 231 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 TMEM234Q8WY98 164 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 JADE3Q92613 823 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 ARL8AQ96BM9 186 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 DNAJA3Q96EY1 480 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 FAHD2AQ96GK7 314 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 ANKRD27Q96NW4 1050 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 SDF2Q99470 211 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 PAFAH2Q99487 392 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 ACTRT3Q9BYD9 372 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 ZNF350Q9GZX5 532 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 PIF1Q9H611 641 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 NARFLQ9H6Q4 476 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 ZNF275Q9NSD4 429 aaPredicted RBP6.61□□□□□ -1.35
SMC3-202ENST00000462899 MED29Q9NX70 200 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 TREM2Q9NZC2 230 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 NINJ2Q9NZG7 142 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 TMEM216Q9P0N5 145 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 TMEM181Q9P2C4 612 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 PPIAL4AQ9Y536 164 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 PTGDR2Q9Y5Y4 395 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 CCDC151A5D8V7 595 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 DNAJC9-AS1A6NH13 148 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 J3QLI3 93 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 ANKRD28O15084 1053 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 SYNGR3O43761 229 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 FCMRO60667 390 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 EIF1BO60739 113 aaKnown RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 LGI1O95970 557 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 PRTN3P24158 256 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 ATP5F1P24539 256 aaPredicted RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 FKBP2P26885 142 aaKnown RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 TMEM33P57088 247 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 TUBA1BP68363 451 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 TUBA4AP68366 448 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 TAGLNQ01995 201 aaKnown RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 FDX2Q6P4F2 183 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 TUBA1AQ71U36 451 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 DOK3Q7L591 496 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 GRINAQ7Z429 371 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 RELL1Q8IUW5 271 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 RIBC1Q8N443 379 aaPredicted RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 ZNF614Q8N883 585 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 SYT14Q8NB59 555 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 OR9K2Q8NGE7 335 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 OR2T11Q8NH01 316 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 RDH5Q92781 318 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 PPCDCQ96CD2 204 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 MTERF3Q96E29 417 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 ZNF75AQ96N20 296 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 TSSK3Q96PN8 268 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 ALKBH3Q96Q83 286 aaPredicted RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 OR7D2Q96RA2 312 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 KCNS3Q9BQ31 491 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 SF3B5Q9BWJ5 86 aaKnown RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 C1QTNF5Q9BXJ0 243 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 MRPL37Q9BZE1 423 aaKnown RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 IQCGQ9H095 443 aaKnown RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 ZMAT3Q9HA38 289 aaKnown RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 NTN4Q9HB63 628 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 NOX3Q9HBY0 568 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 MOV10Q9HCE1 1003 aaKnown RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 MID1IP1Q9NPA3 183 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 ZDHHC18Q9NUE0 388 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 TMEM45AQ9NWC5 275 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 ATP6V1HQ9UI12 483 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 ZNF180Q9UJW8 692 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 SPIN1Q9Y657 262 aaPredicted RBP6.6□□□□□ -1.35
SMC3-202ENST00000462899 SAR1BQ9Y6B6 198 aa6.6□□□□□ -1.35
SMC3-202ENST00000462899 A0A0G2JMP0 313 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 A0A0X1KG70 313 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 TMEM72A0PK05 275 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 AQP7P3A6NL99 342 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 TRIM49D1C9J1S8 452 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 RPL36A-HNRNPH2H7BZ11 118 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 ZNF208O43345 1280 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 AKAP10O43572 662 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 PLPP2O43688 288 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 PRSS23O95084 383 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 BCL10O95999 233 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 CSTAP01040 98 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms