RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MRPL19P49406 292 aaKnown RBP15□□□□□ -0.01
TOP3A-202ENST00000461127 RNF144AP50876 292 aaPredicted RBP15□□□□□ -0.01
TOP3A-202ENST00000461127 KLF10Q13118 480 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 PTGR1Q14914 329 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 AGKQ53H12 422 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 C9orf135Q5VTT2 229 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 PEG10Q86TG7 708 aaKnown RBP15□□□□□ -0.01
TOP3A-202ENST00000461127 FITM2Q8N6M3 262 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 ZNF614Q8N883 585 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 PIGXQ8TBF5 258 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 SLC25A43Q8WUT9 341 aaPredicted RBP15□□□□□ -0.01
TOP3A-202ENST00000461127 NEU4Q8WWR8 484 aaPredicted RBP15□□□□□ -0.01
TOP3A-202ENST00000461127 CIDECQ96AQ7 238 aaPredicted RBP15□□□□□ -0.01
TOP3A-202ENST00000461127 STACQ99469 402 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 DUSP22Q9NRW4 184 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 CA10Q9NS85 328 aa15□□□□□ -0.01
TOP3A-202ENST00000461127 A0A0G2JK05 382 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 ZNF716A6NP11 495 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 ETV2O00321 342 aaPredicted RBP14.99□□□□□ -0.01
TOP3A-202ENST00000461127 EIF4E2O60573 245 aaKnown RBP14.99□□□□□ -0.01
TOP3A-202ENST00000461127 DDX5P17844 614 aaKnown RBP14.99□□□□□ -0.01
TOP3A-202ENST00000461127 PRPS1L1P21108 318 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 LIMS1P48059 325 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 CLNS1AP54105 237 aaKnown RBP14.99□□□□□ -0.01
TOP3A-202ENST00000461127 FOXG1P55316 489 aaPredicted RBP14.99□□□□□ -0.01
TOP3A-202ENST00000461127 UFM1P61960 85 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 DEFA6Q01524 100 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 MAPRE2Q15555 327 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 NDUFAF6Q330K2 333 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 SYT14P1Q58G82 188 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 CASP12Q6UXS9 341 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 OR52E4Q8NGH9 312 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 CDS1Q92903 461 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 PPCDCQ96CD2 204 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 CCDC106Q9BWC9 280 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 ZNF696Q9H7X3 374 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 TMEM45AQ9NWC5 275 aa14.99□□□□□ -0.01
TOP3A-202ENST00000461127 ZNF264O43296 627 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 AKAP10O43572 662 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 RGS9O75916 674 aaPredicted RBP14.98□□□□□ -0.01
TOP3A-202ENST00000461127 CRYAAP02489 173 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 OR4A8P0C604 315 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 TFPIP10646 304 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 UBL4AP11441 157 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 IFNGR1P15260 489 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 RPL3P39023 403 aaKnown RBP14.98□□□□□ -0.01
TOP3A-202ENST00000461127 SLC16A1P53985 500 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 ATP12AP54707 1039 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 CLDN8P56748 225 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 HILS1P60008 231 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 SLC25A3Q00325 362 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 CCNIQ14094 377 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 EFNB3Q15768 340 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 FAM91A1Q658Y4 838 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 ANKRD26P1Q6NSI1 321 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 CDC73Q6P1J9 531 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 USP43Q70EL4 1123 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 KRTCAP2Q8N6L1 136 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 GLB1L3Q8NCI6 653 aaPredicted RBP14.98□□□□□ -0.01
TOP3A-202ENST00000461127 TMEM234Q8WY98 164 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 ST8SIA1Q92185 356 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 ZNF764Q96H86 408 aaPredicted RBP14.98□□□□□ -0.01
TOP3A-202ENST00000461127 EGLN2Q96KS0 407 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 QRSL1Q9H0R6 528 aaKnown RBP14.98□□□□□ -0.01
TOP3A-202ENST00000461127 PIGUQ9H490 435 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 PLK3Q9H4B4 646 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 ACSS1Q9NUB1 689 aaPredicted RBP14.98□□□□□ -0.01
TOP3A-202ENST00000461127 PARPBPQ9NWS1 579 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 CCDC167Q9P0B6 97 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 SH3BP4Q9P0V3 963 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 GRIP1Q9Y3R0 1128 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 DTNAQ9Y4J8 743 aa14.98□□□□□ -0.01
TOP3A-202ENST00000461127 SPIN1Q9Y657 262 aaPredicted RBP14.98□□□□□ -0.01
TOP3A-202ENST00000461127 VSTM5A8MXK1 200 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 PDLIM1O00151 329 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 NR5A2O00482 541 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 ANKRD28O15084 1053 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 PGCP20142 388 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 SLC1A3P43003 542 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 MAGEA8P43361 318 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 POLR2JP52435 117 aaKnown RBP14.97□□□□□ -0.01
TOP3A-202ENST00000461127 MERTKQ12866 999 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 KRT72Q14CN4 511 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 ADIPOQQ15848 244 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.97□□□□□ -0.01
TOP3A-202ENST00000461127 VHLLQ6RSH7 139 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 R3HCC1LQ7Z5L2 792 aaKnown RBP14.97□□□□□ -0.01
TOP3A-202ENST00000461127 ZNF786Q8N393 782 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 TEX29Q8N6K0 151 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 OR9I1Q8NGQ6 314 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 WDR60Q8WVS4 1066 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 CMTM5Q96DZ9 223 aa14.97□□□□□ -0.01
TOP3A-202ENST00000461127 PRPF18Q99633 342 aaKnown RBP14.97□□□□□ -0.01
TOP3A-202ENST00000461127 ZCCHC3Q9NUD5 404 aaKnown RBP14.97□□□□□ -0.01
TOP3A-202ENST00000461127 SERINC4A6NH21 518 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 SCAMP2O15127 329 aaKnown RBP14.96□□□□□ -0.01
TOP3A-202ENST00000461127 TMPRSS2O15393 492 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 DNPH1O43598 174 aa14.96□□□□□ -0.01
TOP3A-202ENST00000461127 HMGN2P05204 90 aaKnown RBP14.96□□□□□ -0.01
TOP3A-202ENST00000461127 PAX7P23759 505 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms