RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 FRS3O43559 492 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 HNRNPCL1O60812 293 aaKnown RBP19.99■□□□□ 0.79
PTPN4-207ENST00000460162 HNRNPCL4P0DMR1 293 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 TTKP33981 857 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 RPS26P11Q5JNZ5 115 aaPredicted RBP19.99■□□□□ 0.79
PTPN4-207ENST00000460162 C11orf71Q6IPW1 123 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 LSRQ86X29 649 aaPredicted RBP19.99■□□□□ 0.79
PTPN4-207ENST00000460162 PRIMA1Q86XR5 153 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 DEPDC4Q8N2C3 294 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 TMEM99Q8N816 258 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 POMGNT2Q8NAT1 580 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 VPS33AQ96AX1 596 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 SPATA9Q9BWV2 254 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 TAPBPLQ9BX59 468 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 SLC17A5Q9NRA2 495 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 CBLN4Q9NTU7 201 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 GDF2Q9UK05 429 aaPredicted RBP19.99■□□□□ 0.79
PTPN4-207ENST00000460162 A8MVM7 634 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 E7EQL1 145 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 NDUFS7O75251 213 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 AKR7A3O95154 331 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 MPGP29372 298 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 FADDQ13158 208 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 PRAMEF8Q5VWM4 474 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 PRAMEF7Q5VXH5 474 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 WDR31Q8NA23 367 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 SLC35B4Q969S0 331 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 ADAD1Q96M93 576 aaKnown RBP19.98■□□□□ 0.79
PTPN4-207ENST00000460162 RAD21L1Q9H4I0 556 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 ZNF232Q9UNY5 417 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 B3GALT5Q9Y2C3 310 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 IFT52Q9Y366 437 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 USH1CQ9Y6N9 552 aa19.98■□□□□ 0.79
PTPN4-207ENST00000460162 CHD3Q12873 2000 aaKnown RBP19.97■□□□□ 0.79
PTPN4-207ENST00000460162 TMEM229AB2RXF0 380 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 VAMP5O95183 116 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 BMP2P12643 396 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 NCF2P19878 526 aaPredicted RBP19.97■□□□□ 0.79
PTPN4-207ENST00000460162 MRPL19P49406 292 aaKnown RBP19.97■□□□□ 0.79
PTPN4-207ENST00000460162 RGNQ15493 299 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 C9orf135Q5VTT2 229 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 ZNF544Q6NX49 715 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 B3GLCTQ6Y288 498 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 AAED1Q7RTV5 226 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 ABHD12BQ7Z5M8 362 aaPredicted RBP19.97■□□□□ 0.79
PTPN4-207ENST00000460162 GPAT4Q86UL3 456 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 FBXL14Q8N1E6 418 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 MUC15Q8N387 334 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 CLIP4Q8N3C7 705 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 ZIC4Q8N9L1 334 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 MAPK1IP1LQ8NDC0 245 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 GTF2H4Q92759 462 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 C3orf49Q96BT1 292 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 ZNF385AQ96PM9 386 aaKnown RBP19.97■□□□□ 0.79
PTPN4-207ENST00000460162 CACNG6Q9BXT2 260 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 PAIP1Q9H074 479 aaKnown RBP19.97■□□□□ 0.79
PTPN4-207ENST00000460162 BCL2L10Q9HD36 194 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 A4GALTQ9NPC4 353 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 ADPRHL2Q9NX46 363 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 CHST2Q9Y4C5 530 aa19.97■□□□□ 0.79
PTPN4-207ENST00000460162 SONP18583 2426 aaKnown RBP19.97■□□□□ 0.79
PTPN4-207ENST00000460162 NPIPB7O75200 414 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 PRG2P13727 222 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 STX1BP61266 288 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 SLC25A3Q00325 362 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 BNIP2Q12982 314 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 C1orf140Q5VVS0 124 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 KLHL24Q6TFL4 600 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 EPGNQ6UW88 154 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 SERPINA11Q86U17 422 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 BBS10Q8TAM1 723 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 BOD1Q96IK1 185 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 C7orf26Q96N11 449 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 FKRPQ9H9S5 495 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 PCDHB14Q9Y5E9 798 aa19.96■□□□□ 0.79
PTPN4-207ENST00000460162 ABCA1O95477 2261 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 TP53P04637 393 aaPredicted RBP19.95■□□□□ 0.78
PTPN4-207ENST00000460162 HOXB9P17482 250 aaPredicted RBP19.95■□□□□ 0.78
PTPN4-207ENST00000460162 PTNP21246 168 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 P2RY4P51582 365 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 NUDT6P53370 316 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 PRPS1P60891 318 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 IRX1P78414 480 aaPredicted RBP19.95■□□□□ 0.78
PTPN4-207ENST00000460162 ZNF311Q5JNZ3 666 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 BEND6Q5SZJ8 279 aaPredicted RBP19.95■□□□□ 0.78
PTPN4-207ENST00000460162 TMEM225Q6GV28 225 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 SLC2A7Q6PXP3 512 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 GOLGA6L1Q8N7Z2 621 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 STK35Q8TDR2 534 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 HEATR1Q9H583 2144 aaKnown RBP19.95■□□□□ 0.78
PTPN4-207ENST00000460162 OBP2BQ9NPH6 170 aa19.95■□□□□ 0.78
PTPN4-207ENST00000460162 H7C417 338 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 CLIC1O00299 241 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 POLR3GO15318 223 aaPredicted RBP19.94■□□□□ 0.78
PTPN4-207ENST00000460162 SSX4O60224 188 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 CRLF1O75462 422 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 AHSA1O95433 338 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 WNT11O96014 354 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 NUDT7P0C024 238 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 FABP6P51161 128 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms