RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 AP2A2O94973 939 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ADH1BP00325 375 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 PNPP00491 289 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 MT-ND2P03891 347 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 CD2P06729 351 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 NPSP0C0P6 89 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC35E2P0CK97 266 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 IL1RNP18510 177 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 DRD1P21728 446 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 HTR2AP28223 471 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 NTSR1P30989 418 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 DGKEP52429 567 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 HCCSP53701 268 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 EMP2P54851 167 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 TAS2R38P59533 333 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 IL5RAQ01344 420 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 RASGEF1BQ0VAM2 473 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 NPRL3Q12980 569 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 OR4D1Q15615 310 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 CST6Q15828 149 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 BSXQ3C1V8 233 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 PLA1AQ53H76 456 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 LRIF1Q5T3J3 769 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 PRAMEF20Q5VT98 475 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 TRIQKQ629K1 86 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ETFRF1Q6IPR1 90 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 EIF5AL1Q6IS14 154 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ABHD13Q7L211 337 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 UBE3DQ7Z6J8 389 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 THOC6Q86W42 341 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 FUNDC1Q8IVP5 155 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 PELI3Q8N2H9 469 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 SPICQ8N5J4 248 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 SIDT2Q8NBJ9 832 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 OR6K3Q8NGY3 331 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 OR2G2Q8NGZ5 317 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 RNASEH2CQ8TDP1 164 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 MITD1Q8WV92 249 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 DPF1Q92782 380 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 WNT2BQ93097 391 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 SCAMP4Q969E2 229 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 MBOAT4Q96T53 435 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 CNN2Q99439 309 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 S100A13Q99584 98 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 COPS8Q99627 209 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 GINS4Q9BRT9 223 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 TMEM43Q9BTV4 400 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 OR51J1Q9H342 316 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 TPT1P8Q9HAU6 139 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 BARX1Q9HBU1 254 aaPredicted RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ABCB9Q9NP78 766 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 LHX9Q9NQ69 397 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 SLC2A4RGQ9NR83 387 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 RASL12Q9NYN1 266 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 H2AFY2Q9P0M6 372 aaPredicted RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 NCDNQ9UBB6 729 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 IKZF3Q9UKT9 509 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 FAM50BQ9Y247 325 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 FNDC3AQ9Y2H6 1198 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 V9GYS6 101 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 A0A1W2PQF6 199 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ANXA2P2A6NMY6 339 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 C10orf142B7Z368 130 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 PROB1E7EW31 1015 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 E9PQ18 207 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 SMLR1H3BR10 107 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 M0R082 166 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 M0R3H8 397 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 BHLHE40O14503 412 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 WNT9AO14904 365 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 OR10H3O60404 316 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 KDM4BO94953 1096 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 MLYCDO95822 493 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 IFNA21P01568 189 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 IL1AP01583 271 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ALDOCP09972 364 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 GKN3PP0CG01 181 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 RAP2AP10114 183 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 NFYAP23511 347 aaPredicted RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 GADD45AP24522 165 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 MPZP25189 248 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 GRK6P43250 576 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 MRPL19P49406 292 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 RPL14P50914 215 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 IL2P60568 153 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 RAP2BP61225 183 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 RPS14P62263 151 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 PPP3R1P63098 170 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 CSNK1G2P78368 415 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 MRPS21P82921 87 aaKnown RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 HEPACAMQ14CZ8 416 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 HMGN3Q15651 99 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ATP6V1FQ16864 119 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 DUOXA1Q1HG43 343 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ZNF284Q2VY69 593 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 POM121L1PQ3SYA9 428 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 ZNF658BQ4V348 819 aaPredicted RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 PYCR3Q53H96 274 aa6.31□□□□□ -1.4
CUBNP3-201ENST00000457461 SPIN4Q56A73 249 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms